Helicobacter pylori 2018: hp2018_0535
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Entry
hp2018_0535 CDS
T01914
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
hpw
Helicobacter pylori 2018
Pathway
hpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
hp2018_0535 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpw03021
]
hp2018_0535 (rho)
03019 Messenger RNA biogenesis [BR:
hpw03019
]
hp2018_0535 (rho)
Transcription machinery [BR:
hpw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
hp2018_0535 (rho)
Messenger RNA biogenesis [BR:
hpw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
hp2018_0535 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
Spore_III_AA
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADZ51229
LinkDB
All DBs
Position
complement(535396..536712)
Genome browser
AA seq
438 aa
AA seq
DB search
MNENAPTHKSSHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEI
LKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVT
GQVRSPKDQEKYYALLKVEAINYSPSDEIRNRPLFDNLTPLFPDEQIKLEYESTKVTGRM
LDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQR
SVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSS
GKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNS
EIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYS
KMQQTKDNEEFLNLMNEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacgcgcctacgcacaaaagttcgcacaaggtcaaaacccacacgccagtg
agcggttatcacattgaagatttacgcacctaccctactgaaaagcttttagaaatcgct
aacaagctcaaagtggaaaacccccaagaattcaaacgacaagacttgatgtttgaaatt
ttaaaaacccaagtcacgcaaggcggatacattctttttaccgggattttagaaatcatg
cctgatggctatggctttttaagagggtttgacgggagtttttcagacgggcataacgac
acttatgtcagcccttctcaaatcaggcgttttgctttaaggaatggcgatattgttacc
ggtcaagtgcgatcccccaaagaccaggaaaaatactacgcccttttaaaagtggaggct
atcaattactcgccttcagatgagattagaaaccgccctttgtttgacaatctaaccccc
ctattccctgatgaacagatcaaattggaatacgaatccactaaagttaccggcaggatg
ctggatttattcagccctgtggggaaaggccaaagggctttaatcgtcgcgccgccaagg
accgggaaaacggagctgatgaaagagctcgcccaaggtatcacttctaaccaccctgaa
gtggaactgatcatccttttagtggatgagcgccctgaagaagttacggatatgcagcga
agcgttaagggtcaagtctttagctccacttttgatttgccagccaataatcacataaga
atcgctgaattagtcttagaaagggctaaaaggcgagtggaaatgggtaaagatgtggta
gttttattggattctatcacccgtttagcaagggcgtataacgccgtaacgccctcaagc
ggtaaggttttaagcggaggcgtggatgcgaacgccttgcacaggcctaagcgctttttt
ggggccgcaaggaatattgaagaaggcgggagcttaacgattatcgctacggcgttgatt
gaaacgggatctagaatggatgaggtgatttttgaagaatttaaaggcaccgggaatagc
gaaatcgttttagcgaggaatattgcagacaggcgcatttacccggcctttgatatttta
aaatccggcacacgaaaagacaatatcttgcttggcaaagaccgcttgactaaagtgtgg
gttttaaggaatgtgatgcaacaaatggacgacatagaagccttaagctttgtgtattct
aaaatgcaacaaactaaggacaatgaagaatttttaaatttaatgaatgaaaaataa
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integrated database retrieval system
