Helicobacter pylori 2018: hp2018_0688
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Entry
hp2018_0688 CDS
T01914
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpw
Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpw03032
]
hp2018_0688 (gyrA)
03400 DNA repair and recombination proteins [BR:
hpw03400
]
hp2018_0688 (gyrA)
Enzymes [BR:
hpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
hp2018_0688 (gyrA)
DNA replication proteins [BR:
hpw03032
]
Prokaryotic type
DNA Topoisomerases
hp2018_0688 (gyrA)
DNA repair and recombination proteins [BR:
hpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
hp2018_0688 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
ADZ51384
LinkDB
All DBs
Position
703719..706205
Genome browser
AA seq
828 aa
AA seq
DB search
MQDHLVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALAHVLENPNAELDEILEFVKGPDFPTGGIIYGKAGIVEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTTIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSPSPEVAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNEVVKTELLEVKEQ
FSSPRRTEIQESYESIDTEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGST
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGGNRSYSGIRAIVLDEGDELVGAKVVDKN
AKHLLIASHLGIFIKFPLEDVREIGRTTRGVRGIKLNENDFVVGAVVISDDSNKLLSVSE
NGLGKQTLAEAYREQSRGGKGVIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVS
IKDIRETGRNASGVKLINTTDKVVYVNSCPKEEEPENLETSSVQNLFE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcatttagtcaatgaaacaaaaaatattgtagaagtggggattgattcttcc
attgaagagagctatttggcttattccatgagcgtgatcataggacgcgccttaccggac
gctagagacggcttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttctaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgacaccgcagtttatgatgcgttagtgagaatggcgcaagatttt
tctatgcgcttggaattagtggatgggcagggtaactttggctctattgatggtgataac
gctgcagcgatgcgttacactgaagccagaatgactaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgacgataccttaaaagagccg
gatattctaccaagtcgtctgcctaaccttttagtcaatggggctaatgggatcgccgta
gggatggcgacttctatccccccccacaggattgatgaaatcatagacgctttagcgcat
gtcttagaaaaccctaacgctgaattagatgaaattttggaatttgtcaaagggcctgac
tttcctactggtgggatcatttatggcaaggcgggtattgttgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgggctaaagtgcatgtggaaaaaacaaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaagcaaattgaaggcattagcgaagtgcgcgatgaaagcgataga
gagggaattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctttacaaactcaccactatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aagaccactattataagacgcacgatttttgaattagaaaaggctaaggccagagcgcat
attttagagggctatttgatcgccttggacaatattgatgaaatcgtgcgactcattaaa
acaagcccaagcccagaagtggctaaaaatgccttaatggagcgtttcactttgagcgag
atccaaagcaaagccattttagaaatgcgtttgcaacgcttgacaggccttgaaagagat
aagatcaaagaagaataccaaaacttattagagcttattgatgatctcaatggtatttta
aagagcgaagatcgcttgaatgaggtcgtcaaaaccgagcttttagaagtcaaagagcag
ttttcttctccaaggcgtactgaaattcaagaatcttacgaaagcattgacacagaagat
ttgatcgctaatgagcctatggtagtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcctatgaaaggcaaaatcgtggcggtaaaggcaagctttcaggcagcact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataaaatcccagaagcgagccgg
atcgctatgggtaaagccattgtgaatttaatttcgctcgctccggatgaaaagatcatg
gcaaccctaagcactaaagattttagcgatgaacgctctttagctttcttcacgaaaaat
ggcgtggtgaagcgcactaatttgagcgaatttggcggtaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattagtgggtgcaaaagttgtggataaaaac
gctaagcatttgctcatcgcatcgcatttgggtattttcattaaattccctttagaagac
gtgcgcgagatcggaagaactactcgtggggttagagggattaagctgaatgaaaatgat
tttgttgtcggcgcggtcgtcattagcgatgatagcaataagcttttgagcgtgagcgaa
aacgggcttggcaagcaaactctagccgaagcgtatagagagcaatctcgtggaggtaag
ggggtcattggcatgaagctcactcaaaagaccggtaatttggtgagcgttatcagcgtg
gatgatgagaacctggatttgatgattcttactgcgagcgcgaaaatgatcagagtttcc
attaaagatattagagaaaccggaagaaatgccagtggggtaaaactcataaacaccact
gataaagtcgtgtatgtcaattcttgccctaaagaagaagagccagaaaatttagaaacc
tcttcggtgcaaaatttgtttgagtga
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integrated database retrieval system
