Helicobacter pylori 2018: hp2018_0717
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Entry
hp2018_0717 CDS
T01914
Symbol
rimO
Name
(GenBank) Ribosomal protein S12p methylthiotransferase/Ribosome maturation factor
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpw
Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpw03009
]
hp2018_0717 (rimO)
Enzymes [BR:
hpw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
hp2018_0717 (rimO)
Ribosome biogenesis [BR:
hpw03009
]
Prokaryotic type
ribosomal protein modification factors
hp2018_0717 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Rotavirus_VP3
CLP1_P
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
ADZ51417
LinkDB
All DBs
Position
complement(732039..733358)
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AA seq
439 aa
AA seq
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MQVKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDAKKADVILINTCGFIESAKQES
IQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDILIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
DLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQALKSARILYLYPSSTTLEL
IGAIEDSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNHSFKALLNKPIKALVERKEGEYFYKARDLRWAPEVDGEILINDSALTTPLQPGHYT
IVPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttaaagaaaacaaacaactctgcttgatctcattaggttgctctaaaaacttg
gtggattcagaagtgatgttaggcaagctttataactacacgctcaccaatgacgctaaa
aaagccgatgtgattttgatcaacacttgcgggtttattgaaagcgctaaacaagagagt
atccaaaccattctcaacgccgccaaagacaaaaaagagggagcgattttaattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagagctgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatattttaatcgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcatcatcaccggatcgagc
gtgcatgcttacgttaaaatttctgagggctgtaaccaaaaatgctctttttgcgctatc
cctagctttaaggggaaattgcaaagcagggaattagattccattttaaaagaagtagaa
gatctagcccttaagggctataaggatatgacttttatcgctcaagactctagctcattt
ttatacgataaggggcaaaaagacggcttgatccagctcattaaggcaattgacaaacaa
caagccttaaagagcgctcgtatcttatacctctacccctctagcaccactttagagctg
attggcgcgattgaagactcgcctatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcgccgtaactctagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttataagaagcacgatcattgtaggg
catccagaagaaaatgagggcgaatttgaagaattgagcgcgtttttagatgagtttcgg
tttgatcgattgaatatttttgctttcagcgcggaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgcccgcattaaagccttgaataaaatcgcttta
aaacaccaaaaccattcttttaaggctttgttgaataagcccattaaggcgttagtggaa
cgtaaagagggcgagtatttttacaaagctagggatctcaggtgggcgcctgaagtggat
ggggaaattttaatcaacgacagcgccttaaccacccctttacaacccggtcattacacg
attgtgcctagcgcctttaaagacaatatcttactcgctaaggttttaagccctttttaa
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