Helicobacter pylori 2018: hp2018_0911
Help
Entry
hp2018_0911 CDS
T01914
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpw
Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpw03016
]
hp2018_0911
Enzymes [BR:
hpw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
hp2018_0911
Transfer RNA biogenesis [BR:
hpw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
hp2018_0911
Prokaryotic type
hp2018_0911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
ADZ51615
LinkDB
All DBs
Position
929487..930632
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNSSTRDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGSQRFGKFNDNHKEG
LKILQNETKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISTFSVKENLEFFKQKNLS
VNSNALKALKNQAHPFKILEGDVMRHYPYGKFFDALKLEKESERFLNKEAVPTGLLDGKK
ALYAKNLSLEIEKGFQHNLLSSHARTLGSRRFFWVFAENITSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcactagggatttttgcgtgcatgaagtgcctttgtatgaatttagcaac
acgggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgccgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccat
cacaataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacggagcaagttttagaacaaatcgcgcagtttggc
atgcctaattattttggttcgcaacgctttgggaagttcaatgacaaccataaagagggt
ttaaaaatcttacaaaatgaaacgaaattcgctcatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaactcgcttttaagcaaacgattagaaatcagtaaa
atcattagcacttttagcgtcaaagaaaatttagaattttttaaacaaaaaaatttaagc
gttaattcaaacgccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgcgccattacccttatgggaagttttttgacgctttgaaattagaaaaa
gagagcgaaaggtttttgaacaaagaagctgtgcctacggggttactagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaaggattccagcataacctttta
agtagccatgctagaacgctaggatccaggcggtttttttgggtgtttgcagaaaatata
acttctcaatacatcaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
DBGET
integrated database retrieval system
