Helicobacter pylori 2018: hp2018_09681
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Entry
hp2018_09681 CDS
T01914
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpw
Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpw03032
]
hp2018_09681
03400 DNA repair and recombination proteins [BR:
hpw03400
]
hp2018_09681
Enzymes [BR:
hpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
hp2018_09681
DNA replication proteins [BR:
hpw03032
]
Prokaryotic type
DNA Topoisomerases
hp2018_09681
DNA repair and recombination proteins [BR:
hpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
hp2018_09681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
SpecificRecomb
Motif
Other DBs
NCBI-ProteinID:
ADZ51678
LinkDB
All DBs
Position
988533..989960
Genome browser
AA seq
475 aa
AA seq
DB search
MYKNCVFIIESPNKITKIKELTGSSFVFATGGHFVELVNIEVSKEFNPIFEIKKSTDKKK
DRSTHINHMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNIAKTIYRTEFHEITKSGVE
KGLNNAVLFSQSNLNLYYSWLGRIVSDQFIGFTLTPYLRKNIKNFEVSAGRVQTPALSIL
VELDKKIQAFEQKSIDEKLSYSIEAIIDALGSQISITLVEEDKRKVFETKELAQNFLNDL
KNNLNPLAFLDSIEQKDKEKAPPKPFTTSNLLKDGVRILEMGVKQIQEHAQKLFEAGLIT
YIRTDSESLSKEYLQEHEAFFENIYPSVYEYREYNAGKNSQAEAHEAIRITHPHCYEDLK
KVCEEHNITDTDDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKTHSFKCSFSQLKSKGF
KAIKDLEEEKKDEEWVESDIDFSSLQLKTQMPILDFNIKEIKAKSPSPYTALLLQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaactgcgtatttatcatagaaagtcccaataaaatcactaaaatcaaagaa
ttaacaggaagttcatttgtttttgcaactggtgggcattttgttgagttagtcaatatc
gaagtgagtaaagaatttaaccctatttttgaaatcaaaaaaagcacagataagaaaaaa
gatagatccactcatatcaaccacatgatcaatcaatgtaaagacaaagtggtctatatt
gctactgaccctgatagagaaggttatggcataggttataaattttatgaaaaaatcaaa
aatatagctaaaacaatttatcgcacggagtttcatgaaatcacaaaaagcggtgtggaa
aaaggcttgaataatgctgtgctattttctcaaagcaatctcaatctctattatagctgg
ctaggtaggattgtaagcgatcaatttataggttttactttaacgccttatttgcgcaaa
aatattaagaattttgaagtgagtgctggcagagttcaaacccctgctctttccattcta
gtagaattagacaaaaaaatccaagcctttgaacaaaaaagcattgatgagaaattaagt
tatagcatagaagctattattgatgcgctaggttctcaaatctctattactttagtagaa
gaggataaaaggaaagtgtttgagactaaagaattagcccaaaattttttaaatgactta
aaaaacaatcttaacccattagcttttttagactcaatagagcaaaaagataaagaaaaa
gctccacctaaacctttcaccacttctaatcttttaaaagatggggttagaattttagaa
atgggcgttaagcaaatccaagaacacgcccaaaaactttttgaagctggattgattact
tatattcgcaccgatagcgaatcattaagcaaagaatacttgcaagaacatgaagcgttt
tttgaaaatatttatcctagcgtgtatgaatacagagaatataatgctggtaaaaattcg
caagctgaagcgcatgaggctataagaattacacaccctcactgctatgaagatcttaaa
aaagtgtgtgaggaacacaatattacagatactgatgatttaaaagtttatacgcttatc
ttttttaacaccatttgttctcaaagtaaaaacgctatttatgaaaacacaactttaaac
tttaaggtaaaaacgcacagctttaaatgcagttttagccaactcaaatctaaaggtttt
aaagcgattaaagacttagaagaagaaaagaaagatgaagaatgggttgaaagcgatatt
gatttttcaagcttgcaattaaaaactcaaatgcctattttagatttcaatatcaaagaa
ataaaagctaaatcccctagcccttatactgcacttttattgcaatga
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