Helicobacter pylori 2018: hp2018_1049
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Entry
hp2018_1049 CDS
T01914
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpw
Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpw03016
]
hp2018_1049 (truA)
Enzymes [BR:
hpw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
hp2018_1049 (truA)
Transfer RNA biogenesis [BR:
hpw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
hp2018_1049 (truA)
Prokaryotic type
hp2018_1049 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADZ51764
LinkDB
All DBs
Position
1071442..1072170
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AA seq
242 aa
AA seq
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MRCFKAIVAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVIAAGRTDKGVHANNQA
LSFHAPKHWNADKLFHYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDLLNTALKQFIGKHDFSMFKKEGGATTNPNRIIFNALAYKTFIMGHEC
VVFKIIGDAFLRSSVRLIIKACVQYSLEKIALAEIQAQIHNLKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaagccattgtggcttatgatggggcgtattttttaggctatgccaaa
cagcccaacaaacttggcgttcaggataaaatagaaagcgctttaaacgcgctagggatt
aaaagcgttgtgattgcggctgggcgcacggataaaggcgtgcatgcgaacaaccaagcg
ttgtcttttcacgctccaaaacactggaatgctgataaattatttcattatctagccccc
aaactcgccccgcacattgtcttaaaaaaactagaagaaaagaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactagatttattaaataccgctttaaag
caattcataggcaagcatgatttttccatgtttaaaaaagagggcggcgctacaaccaac
cctaatcgcatcatttttaacgctttggcttataaaacctttatcatggggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctctagcgtgcgtttgatcattaaa
gcatgcgttcaatactccttagaaaaaatcgcgctcgctgaaattcaagcgcaaatccat
aacctcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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