Helicobacter pylori 2018: hp2018_1414
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Entry
hp2018_1414 CDS
T01914
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase/epsilon proteobacterial type 2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpw
Helicobacter pylori 2018
Pathway
hpw03420
Nucleotide excision repair
hpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
hp2018_1414 (uvrD2)
03430 Mismatch repair
hp2018_1414 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpw03400
]
hp2018_1414 (uvrD2)
Enzymes [BR:
hpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
hp2018_1414 (uvrD2)
DNA repair and recombination proteins [BR:
hpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
hp2018_1414 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
hp2018_1414 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADZ52138
LinkDB
All DBs
Position
complement(1420559..1422604)
Genome browser
AA seq
681 aa
AA seq
DB search
MGFEKSILDNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLNNQAFIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDE
VKTLCKQLKISNFRASISQIKNGMVDLSMQDSECYKAYELYQNALKKDNLVDFDDLLCLS
LKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSCAHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHK
SVVCKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALALMHVAAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLN
LEEALKLGAFKDKLNPKNEYALKKFMAMIGHLREAFEISVEKFCERFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESTLDVHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKIS
CSPSVFLEEAQLIKSDQAPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISEKFVEKVDNEF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaaaaaagcattttggacaatttaaacggagcgcaaaaaatcgctgcaagc
cacattcaagggcctttattgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgaaaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattattgaac
aatcaagcgtttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgaatcttttaaaaagggcgtgcgatttttcggtgctagatagcgatgaa
gtcaaaacgctctgcaaacagctcaaaatttcaaacttcagggcgagtatttctcaaatc
aaaaacggcatggtggatttgagcatgcaagatagcgaatgttataaagcgtatgaactt
tatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgctttgtttaagc
cttaagattttacaagataatgaaaaactcgccaaagagaccagcgaacgctaccattac
attatggtagatgagtatcaagacacgaacgccttgcaattagagtttttaaaacaattg
agttgcgcgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggcggatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagagaccaattatcgctctagcgctgaaattttagcgtgcgctaattccctc
atcagtcataaccaacaccgccacattaaaacgcttcaaagttttaaaggctcgcataaa
agcgtggtttgtaaagaataccccacgcaaaaagaagagagcctggatgtggcttatcag
atcaaagcccttttaaagaagggcgagaatttagaaaatatcgctattttgtatcgccta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccttataggctc
attggagcggtgagtttctatgaaagagccgaggttaaagacgctttggcactcatgcat
gtagcggctaaaaaagacgatcgcttttttatcaagcgcgttttaaacaagcccccaaga
ggccttggcaagatcactcaagaatggattttttctcttttagatgaagagggcttgaat
ttagaagaagcgctaaaacttggggcgtttaaagacaaactcaaccctaaaaacgaatac
gctttaaagaaattcatggccatgatagggcatttgagggaggcttttgaaatttcagta
gagaagttttgcgagcggtttttagaagagactaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggttttgttaaagagcttttaagtttagtgaaagagcat
tttaaaactaaccccacgcattctttactggattttttaaatgaaagcacactggatgtc
cataatacagaaaacgcgcaaaaagtgagctgcatgagcgtgcatatgagtaaggggtta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttggaagaagaaaggcgcttggcttacgtggcgatcactagggct
aaagaaggattgcagctctcttatgtcaaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagcccagttgatcaagagcgatcaagcccctaaa
caaaatcaccaaaaagacacgcccattaaagtgggggatttgatcaaacataagattttt
ggcaccgggagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataacgag
ttttga
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