Helicobacter pylori 83: HMPREF0462_0490
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Entry
HMPREF0462_0490 CDS
T01915
Symbol
rocC
Name
(GenBank) amino-acid permease RocC
KO
K16235
S-methylmethionine transporter
Organism
hpx
Helicobacter pylori 83
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpx02000
]
HMPREF0462_0490 (rocC)
Transporters [BR:
hpx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HMPREF0462_0490 (rocC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease
AA_permease_2
Motif
Other DBs
NCBI-ProteinID:
AEE70095
UniProt:
F4D520
LinkDB
All DBs
Position
complement(472723..474165)
Genome browser
AA seq
480 aa
AA seq
DB search
MDNQKITHQNIVQKQGELKRDMKMRHLLMIAFGGAIGTGLFVGTGGNIASAGPLGTLIAY
CFGGLVVYCIMLSLGELASVYPTTGSFGDYAAKFIGPGTGYMVFWMYWLGWVITVALEYI
AIGMLMQRWFAGIPIHYWVILCIALVFLLNFFSVKIFAEGEFFFSLIKVLAVIAFIGIGA
IGIIYQIYLHGFSSIFDNFHFGDKGFFPNGSAAVFSAMLAVIFAFTGTEVIGVAVGETKN
ASEVMPKAIKATLWRIVFFFLGSVFVISVFLPMSDSSITQSPFVSVLERINLPFIGMGIP
YAADIMNAVIITAMFSTANSGLYGASRMIYGLSKQKMFFKVFSKLNRQGTPTYAMFFSLS
FSLIGLLVQIYAKENVVEALINVISFTVIIVWVSVSVSQYSFRKQYLKAGHSLADLPYKA
PFLPFLQLIGITGCVIGVIGSAMDKDQRIGMILTIVFAIVCYIGYYFTQKANENNKKDLI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaaaagataacgcatcaaaatatcgtgcaaaaacaaggcgagcttaaaaga
gacatgaaaatgcgccatctcttaatgattgcatttgggggagcgattggcacagggctt
tttgtaggcactggaggtaatattgcgagcgctggccctttagggactttgatcgcttat
tgttttggagggcttgtggtctattgcatcatgctctctttaggcgaattggctagcgtt
tatcccactacgggcagttttggggattatgcggctaaattcataggccctggcacgggc
tatatggttttttggatgtattggcttggctgggtgatcacggtggcgctagaatacatc
gctataggcatgctcatgcaacgctggtttgctggtattcctatccattattgggttatt
ttatgcattgcgttagtttttttattgaatttcttttcggtcaaaatttttgccgagggc
gagtttttcttcagcctgattaaagttttagcggtgatcgcttttataggcattggcgcg
attgggatcatctatcaaatctatttgcatgggtttagttctatttttgataatttccat
tttggcgataaggggtttttccctaacgggagcgcggcggtttttagcgcgatgcttgcg
gtgatttttgcattcactggcacagaggtgattggggtggctgtgggagaaaccaaaaac
gctagcgaagtgatgcctaaagcgattaaagcgaccttgtggcggattgtttttttcttt
ttaggctctgtgtttgtcatttctgtttttttacccatgagcgattcttctatcacgcaa
agcccttttgtgagcgttttagaacgcatcaatttgccctttattggcatgggtatccct
tatgcggctgatataatgaacgctgttatcattacggcgatgttttctaccgctaattca
gggctttatggagcgagccgcatgatttatgggctgtccaaacaaaagatgtttttcaag
gttttttccaaactcaaccgacaaggcacgcccacttatgcgatgtttttttccctttct
ttttctctcatagggcttttagtccaaatttatgccaaagaaaatgtcgtggaagctttg
attaatgtgatcagtttcacggtgattattgtgtgggttagcgtgtctgtttcgcaatat
tctttccgtaagcaatatttaaaagccgggcattctttagcagatttgccttataaagcc
ccctttctaccctttttgcaactcatagggatcactgggtgtgtcatcggcgtgattggt
tcggctatggataaggatcaacgcattgggatgattttaacgattgtttttgccattgtg
tgttacattggatactattttacacaaaaagctaatgaaaataacaaaaaagatttgata
taa
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