Helicobacter pylori 83: HMPREF0462_0693
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Entry
HMPREF0462_0693 CDS
T01915
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx03030
DNA replication
hpx03430
Mismatch repair
hpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0462_0693 (dnaX)
03430 Mismatch repair
HMPREF0462_0693 (dnaX)
03440 Homologous recombination
HMPREF0462_0693 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpx03032
]
HMPREF0462_0693 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpx03400
]
HMPREF0462_0693 (dnaX)
Enzymes [BR:
hpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0462_0693 (dnaX)
DNA replication proteins [BR:
hpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0462_0693 (dnaX)
DNA repair and recombination proteins [BR:
hpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0462_0693 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_14
AAA_22
RuvB_N
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_5
EH_Signature
AAA_30
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEE70298
UniProt:
F4D5M3
LinkDB
All DBs
Position
667583..669283
Genome browser
AA seq
566 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNAFLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAPKQEPKSTEKIEKPEKRESAETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNIRFIDFDSQTKTLTWESLATYKDKELLRERFRIVKSIVDGVFGKGESIKIALKNQN
KSALEEIKEFKFPYSKPKPTTETTAEMKEKETKEAVEKETKENDTKEVQETQPKETPTAL
QEFMANHSDLIEEIKSEFEIKSVELL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagttcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcacccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggacggagcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgtttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgctttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaagggagcttaagagatacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgatcggagtgttttagaggatttttttcaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgccattttagagaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttaata
gagcgcttttttaaaatcattatgagtggcttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcccctaaacaagaacccaaaagcacagagaaaatagaaaagccagaaaaa
agagaaagtgcagaaaccccgcaaactcccatgctttcagctaaagatcgcatttttcac
aaccttttcaaacaagttcaaacattggtttatgagcgcaactacgaattaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccacctataaagataaagagcttttaagagagcgttttaggatcgtgaaaagc
attgttgatggggtttttggcaagggcgaaagtatcaaaatcgctttaaaaaatcaaaat
aaaagcgctttagaagaaattaaagagtttaaattcccttattcaaagcccaaaccaacc
accgaaacgacggctgaaatgaaagaaaaagaaactaaagaggcggttgaaaaagaaact
aaagaaaacgacactaaagaggttcaagaaacccaaccaaaagaaacccctacagccttg
caagaattcatggctaaccattctgatctcattgaagagattaagagcgagtttgaaatt
aaaagcgtggaattgttatga
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