Helicobacter pylori 83: HMPREF0462_0796
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Entry
HMPREF0462_0796 CDS
T01915
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0462_0796 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpx01007
]
HMPREF0462_0796 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpx03016
]
HMPREF0462_0796 (aspS)
03029 Mitochondrial biogenesis [BR:
hpx03029
]
HMPREF0462_0796 (aspS)
Enzymes [BR:
hpx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HMPREF0462_0796 (aspS)
Amino acid related enzymes [BR:
hpx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HMPREF0462_0796 (aspS)
Transfer RNA biogenesis [BR:
hpx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HMPREF0462_0796 (aspS)
Prokaryotic type
Other AARSs
HMPREF0462_0796 (aspS)
Mitochondrial biogenesis [BR:
hpx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HMPREF0462_0796 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
H2TH
Motif
Other DBs
NCBI-ProteinID:
AEE70401
UniProt:
F4D5X6
LinkDB
All DBs
Position
complement(778436..780169)
Genome browser
AA seq
577 aa
AA seq
DB search
MRSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKAL
EVRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDL
RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS
RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCS
ENDVMGVVEDLLQEIFKAIGHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFM
DSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIKEDG
IKGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKD
ALNFLWVVNFPMFEKTEYGYHAAHHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSI
RIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSI
RDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcatttctgtgcagaaattagtgaaaaagatgtgggtaaaaccatcaaagtg
gctgggtggtgtaacacttatagagaccatggaggcgtggtttttattgatttaagggat
aaaagcggtttagtgcaattagtctgtgatcctagctctaaggcttatgaaaaggcttta
gaagttaggagtgaatttgtgctagtggctaaaggaaaagcgcgtttaagagggcccggt
ttagaaaaccctaaactaaagaccggtaaaattgaaattgttttagaagagttagtcatt
gaaaataaaagcgctaccccaccgattgaaattggcaataaaaatgtgaatgaagatttg
cgcttgaaataccgctatttggatttacgctctttgaatgcttatgaaatctttaaattg
cgcagcgaagtggctctaatcgctcgtaacgctttagcccaaaagggctttttagagatt
gaaacccccattttgtctaaaaccacgcctgagggggctagggattatttagtgccaagc
agggtgcatgagggcgagtttttcgcgctccctcaaagcccgcaattattcaaacagctt
ttaatggtggggggaatggataggtattttcaaatcgctcgttgctttagagatgaagat
ttgagagcggacaggcagccagaattcacgcaaattgatgcggaaatgagtttttgtagt
gaaaatgatgtgatgggcgtggtggaagatttgttgcaagagatttttaaagcgattggg
catcatatttctaaaccttttaaacgcatgccttataaggaagcgatggaaaattatggg
agcgataagccggatttgcgctttgaattgcctttaatagaagtaggggattgttttatg
gacagctcaaacgctattttttctaatatcgcgcaagatcctaaaaacaaacgcattaaa
gctttgaatgttaagggggctgatgcgatttttagccgcagcgttttaaaagaattagaa
gaatttgtgcgccaatttggggctcaaggcttagcgtatttgcaaattaaagaagatggg
attaaagggcctttagttaaatttttaagcgaaaaggggcttaagaatattttagaaaaa
actgatgcacaaaccggggatattgtcttttttggagccggggataaaaaaatcgtgtta
gattacatggggcgtttgcgcttgaaggtggctgaaacgcttgatttgattgataaagac
gctttgaatttcttatgggtagtcaatttccccatgtttgaaaaaactgaatacggctat
catgctgcgcaccacccttttacgatgcccaaaaatatagaatgcgaagatatagaagag
attgaagcgcatgcgtatgatgtggtgcttaatggcgtggagcttggtggggggagcatt
aggattcataaagaagaaatgcaaaaaaaagtctttgaaaaaatcaatatcaacgaagag
gaagcgcaaaagaaatttggctttttactggaagcgctaaagtttggcgctcctcctcat
gggggctttgcgataggttttgatcgcttgatcatgctaatgaccaaatccagtagcatt
agagatgtgatcgctttccctaaaacgcaaaaagcttcatgtttattgactgacgctcct
agccccattaatgaagagcaactaagagaattacacattcgcttaagaaaataa
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