Helicobacter pylori 83: HMPREF0462_0913
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Entry
HMPREF0462_0913 CDS
T01915
Symbol
glcD
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx00630
Glyoxylate and dicarboxylate metabolism
hpx01100
Metabolic pathways
hpx01110
Biosynthesis of secondary metabolites
hpx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMPREF0462_0913 (glcD)
Enzymes [BR:
hpx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
HMPREF0462_0913 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
YfjL_C
Motif
Other DBs
NCBI-ProteinID:
AEE70518
UniProt:
F4D693
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All DBs
Position
complement(901807..903186)
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AA seq
459 aa
AA seq
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MLDQQHLKYFKNLVGGEDFFTDLAHLNAYCYDATKERHLPSGVIFPRNEQEISQILKYCN
EHRIIVVPRGAGSGFTGGALSVSGGLILSVEKHLDKILEIDTKNLIARVEPGVINKHFQN
EVEKLNLFYPPDPASENQSTLGGNVAENAGGMRAAKYGITKDYVMAMRVVLANGEIIRAG
KKTIKDVAGFNVAGLMIASEGCLGVISEITLKLLAKPPLKQSAMGVFNHIEDAMNAVYKT
MSSGVTPVAMEFLDNLSIKAVEERFSKGLPKDAGAILITQVDGVVKEQIAWQLNEIEKHF
KANGCVGFKIAQNEQEEQDLWFSRRNASQSISVYGKKKLNEDVTVPRASLPSLLQEVAKI
SQKYGFKIPCFGHTGDGNVHVNIMLEDPNRDLEKGHKAMEEIFQAAISLEGTLSGEHGIG
LSKAKFMPLAFNHSEMELFRNIKKALDPNNILNPFKMGL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttagaccaacaacacctcaaatactttaaaaacctagtagggggagaggattttttc
actgatttagcgcatttgaacgcttattgctatgacgctaccaaagaaaggcatttgcct
agcggtgtgattttccctagaaacgagcaagaaatcagccagattttaaaatattgcaac
gagcatcgcatcatcgttgtgcctaggggggctgggagcggttttacagggggggcgttg
agcgtgagcggggggctaattttaagcgtggaaaagcatttggataagattttagagatt
gacactaaaaatttaatcgctagagtggaaccgggcgtgatcaacaagcatttccaaaac
gaagtggaaaaattaaatttattctaccccccagatccagcgagcgagaatcaaagcact
ttaggggggaatgtcgctgaaaacgccggtggcatgcgcgcggctaaatacggcattacg
aaagattatgtcatggcgatgagagtggttttagcgaatggtgaaatcataagggcaggc
aaaaaaacgatcaaagatgtcgcaggctttaatgttgcagggctgatgatcgctagtgag
gggtgtttgggcgtgatttctgaaatcactttaaagcttttagccaaaccgcctttaaaa
caaagcgcgatgggggtttttaaccatattgaagacgccatgaacgctgtttataagaca
atgagcagcggcgttacgcctgtggcgatggaatttttggataatttgagtatcaaagcg
gttgaggaacgattttctaaaggcttacccaaagacgctggagcgatactcatcactcaa
gtggatggcgtggtaaaagagcagattgcatggcaactcaatgagatagaaaagcatttc
aaagctaatgggtgcgtgggttttaagattgctcaaaacgaacaagaagagcaggattta
tggttttcaaggcgtaacgcttctcaaagtattagcgtttatggtaaaaaaaaattgaat
gaagatgtaaccgttcctagggcgagtttgccgagtttgttgcaagaagtcgccaaaata
agccaaaaatacggctttaaaatcccttgctttgggcatacgggcgatggcaatgtgcat
gtgaatatcatgttagaagatcctaatagggatttagaaaaaggccataaggctatggaa
gagatttttcaggccgctatcagtttggaggggactttaagcggggagcatggcataggc
ttgtctaaagccaaattcatgcctttagcgtttaatcatagtgaaatggaactttttagg
aatattaaaaaagcccttgatcctaataatattttaaacccttttaaaatggggttgtaa
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