Helicobacter pylori 83: HMPREF0462_0962
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Entry
HMPREF0462_0962 CDS
T01915
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx03420
Nucleotide excision repair
hpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0462_0962
03430 Mismatch repair
HMPREF0462_0962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpx03400
]
HMPREF0462_0962
Enzymes [BR:
hpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0462_0962
DNA repair and recombination proteins [BR:
hpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0462_0962
MMR (mismatch excision repair)
Other MMR factors
HMPREF0462_0962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
ZapG-like
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEE70566
UniProt:
F4D6E1
LinkDB
All DBs
Position
953348..955378
Genome browser
AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
VLTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNARVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPALLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSHISDIGSNTAKDIHEALMLLG
NGDLKSALIQPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFTLYTKAPTHSPSALIKYILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQVQKRFNEKMDLLSSLAKNYQNLGRFLNSTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccctgagcaactcaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgtatt
ttatacctgcttgataacggcatcaaacctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgccagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttaaaagagcattaccccaattta
agcctgaagcaacctaaagaattgaaaaaacttttagaaagcattgtggataccaaaaac
gtgctaacagatgacgataaaaagccctacacttcgcagcatctctacgccctctattct
ctttataccaacgctctaaaacaagaagatttcagcgcatggctttctcataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacaccaaa
aaaaagcataattatattgactataacgacttactgctgttatttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagatgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgctttcaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccgggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacagcataatgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataaacctgcgcttttaaattacaacgataatattgcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccataatgtgcca
agcaaaagaaaagggagcgcgagcttttttgaatccaaagaagtagcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacatcatggcagcaatccatgttttaagccat
atcagcgatattggctctaacaccgctaaagacattcatgaggccttaatgcttttaggc
aatggtgatctcaaatcggctttaattcagcctaataaagaagctaaaatttacacgaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaatagcgtgatagataaagcgtttcattcacacccggtgttgatgcaccctaaa
atctcactcaatggggctaaaatgcttagcgattttttcactctttataccaaagcccct
acccattcccctagcgctttaatcaaatacattttagaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagagcgctccaaaaataaggacggctcttataacgagtttaaa
aaactccaagtgcaaaaacgcttcaatgaaaaaatggacttgctgagttctttggcgaaa
aattaccaaaatttagggcgttttttaaacagcactttaataggctctagtgaagccacg
caaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttagagtttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagggaaaacgccaaacctaaagagcataaa
ccctcggtgtttttgtatgaagcggggcttttgaaacctgatttaaaataa
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