Helicobacter pylori 83: HMPREF0462_1106
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Entry
HMPREF0462_1106 CDS
T01915
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpx
Helicobacter pylori 83
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpx03016
]
HMPREF0462_1106 (truA)
Enzymes [BR:
hpx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HMPREF0462_1106 (truA)
Transfer RNA biogenesis [BR:
hpx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0462_1106 (truA)
Prokaryotic type
HMPREF0462_1106 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEE70710
UniProt:
F4D276
LinkDB
All DBs
Position
1110083..1110811
Genome browser
AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHADNQV
LSFYAPKHWNAAKLFYHLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRAIFDAFAYKTFIAGHEC
VVFKIIGDAFLRSSVRLIVQACVQYSLEKITLAEIQAQIHNIKAAIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagcgctttaaatgcgctagggatt
aaaagcgttgtggttgcggctgggcgcacggataagggagtgcatgcggacaatcaggtg
ctgtctttttacgctccaaaacactggaatgccgctaaattattttatcatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcaccttatatcgcttgtggggattatggctcactggatgcgttaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggcgacaaccaat
cctaaacgcgctatttttgacgcttttgcttataaaacctttatcgcagggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctccagcgtgcgtttgattgttcaa
gcgtgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacatcaaagccgctataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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