Helicobacter pylori 83: HMPREF0462_1127
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Entry
HMPREF0462_1127 CDS
T01915
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
hpx
Helicobacter pylori 83
Pathway
hpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0462_1127 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpx03400
]
HMPREF0462_1127 (uvrB)
DNA repair and recombination proteins [BR:
hpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0462_1127 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0462_1127 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Microtub_bd
DUF87
AAA_7
Kinesin
SWI2_SNF2
T2SSE
HAM1_N
Motif
Other DBs
NCBI-ProteinID:
AEE70731
UniProt:
F4D297
LinkDB
All DBs
Position
complement(1131644..1133635)
Genome browser
AA seq
663 aa
AA seq
DB search
MRVLKMPLFDLKSPYPPAGDQPQAIEALTKSLKNNNHYQTLVGVTGSGKTYTMANIIANI
NKPTLIMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSIN
DDLERLRLSAAISLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKL
VEMGYSRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALERNEIK
RLDSVMLYAASQFAVGSERLNLAIKSIEDELTLRLKFFKEQDKMLEYNRLKQRTEHDLEM
ISATGVCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAG
DMSRKSVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSKNNVAEQII
RPTGLLDPKFEVRDSDKQVQDLFDEIKLVVARDERVLITTLTKKMAEELCKYYAEWGLKA
RYMHSEIDAIERNHIIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSET
SLIQTMGRAARNANGKVLLYAKKITQSMQKAFEITSYRRAKQEEFNKLHHITPKTVTRAL
EEELKLRDDEVKIAKALKKDKIPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAKL
RTL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttttaaagatgcctttatttgatttaaaaagcccttacccaccagcaggcgat
cagccccaagccatagaagccttaacgaaaagcttaaaaaataacaaccattatcaaact
ttagtgggggttacagggagcggtaagacttatacgatggctaatatcatcgctaacatc
aacaagcccactctgatcatgagccataataagaccttatgcgcgcagctctatagcgag
tttaaggcgtttttcccgcataatagggtggagtattttatctcccactttgattactac
cagcctgaaagctatatccctagaagggatttattcattgaaaaagacagctctattaat
gatgatttagagcgtttgaggttgagcgcagccatctcacttttaggttatgatgatgtg
attgtgatagcgagcgtttcggctaattatggtttaggtaaccctgaagaatatttaaaa
gtcatggaaaaaatcaaagtgggcgagaagcgcgcttataagagctttttattaaagcta
gtagaaatgggttatagccgtaatgaagtggtgtttgatagggggagttttagggcgacc
ggggaatgcgtggatattttccccgcttataatgacgctgaatttatcaggattgaattt
tttggcgatgagatagaaaggattgctgtctttgacgctttagaaagaaatgaaatcaag
cgcttggattctgtcatgctttatgcggccagtcagtttgccgtagggagtgagaggttg
aatttagccattaaaagcattgaagatgagctcactttaaggttgaaattttttaaagag
caggataaaatgcttgaatacaaccgcctcaaacaacgtaccgagcatgatttagaaatg
attagcgcaaccggtgtgtgtaagggcattgaaaattacgcgcgccattttacaggcaaa
gcccctaatgaaacgcctttttgtttgtttgattatttagggatttttgagcgggagttt
ttagtcattgtggatgaaagccatgtgagtttgccgcagtttggagggatgtatgcaggg
gatatgagcaggaaaagcgttttagtggaatatggttttagattgcctagcgctttagac
aaccgccctttaaaatttgatgaatttatccataaaaattgccaattcctttttgtgtcc
gctacgcccaataagctagaattagagctttctaagaataatgtcgctgagcaaatcatt
cgccctacagggcttttagaccctaaatttgaagtgcgagacagcgataagcaagtccag
gatttatttgatgaaatcaagttagtggtggctagagatgaaagggtgctcatcaccacg
ctcactaaaaaaatggcagaagaattgtgcaaatattatgctgaatggggtttgaaagcg
cgttacatgcatagtgaaattgatgcgattgaaaggaatcacatcatccgctctttaagg
cttaaagaatttgacattttaatagggatcaatctcttaagagaagggttggatttgcct
gaagtctctttagtagcgatcatggatgcggataaagaagggtttttaaggagtgaaaca
agcctcattcaaaccatgggacgagccgctagaaacgccaatggcaaggttttattatac
gctaaaaaaatcacccaaagcatgcaaaaagcctttgaaattacgagctacaggcgcgct
aagcaagaagagtttaataagcttcatcatatcacccccaaaaccgttactcgcgcttta
gaagaggagttgaaattaagagacgatgaggttaaaatcgctaaagccttaaaaaaggac
aaaatccctaaaagcgaaagggaaaaaatcattaaagaactggataaaaaaatgcgagaa
tgtgcgaaaaatttggattttgaagaagcgatgcgtttgagagacgaaatcgctaaatta
agaacgctttaa
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integrated database retrieval system
