Helicobacter pylori 83: HMPREF0462_1257
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Entry
HMPREF0462_1257 CDS
T01915
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0462_1257 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpx01007
]
HMPREF0462_1257 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpx03016
]
HMPREF0462_1257 (alaS)
Enzymes [BR:
hpx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HMPREF0462_1257 (alaS)
Amino acid related enzymes [BR:
hpx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HMPREF0462_1257 (alaS)
Transfer RNA biogenesis [BR:
hpx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0462_1257 (alaS)
Prokaryotic type
HMPREF0462_1257 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
ATP-synt_D
Motif
Other DBs
NCBI-ProteinID:
AEE70861
UniProt:
F4D2U5
LinkDB
All DBs
Position
complement(1267859..1270402)
Genome browser
AA seq
847 aa
AA seq
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MDIRNEFLQFFHNKGHAIYPSMPLVPNDATLLFTNAGMVQFKDIFTGIVPRPSIPRATSS
QLCMRAGGKHNDLENVGYTARHHTLFEMLGNFSFGDYFKEEAILFAWEFVTKNLGFKPKD
LYISVHEKDDEAVKLWEKLVPFDRIKKMGDKDNFWQMGDSGPCGPCSEIYIDQGEKHFKG
SEDYFGGEGDRFLEIWNLVFMQYERSNDGVLSPLPKPSIDTGMGLERVQALLEHKLNNFD
SSLFAPLMEEISELTSLDYASEFQPSFRVVADHARAVAFLLAQGVHFNKEGRGYVLRRIL
RRALRHGYLMGLKEAFLYKVVGVVCEQFSNTHAYLKESKEMVLKECFEEEERFLETLESG
MELFNLSLEHLNENKIFDGKIAFKLYDTFGFPLDLTNDMLRSHGACVDMQGFESCMQEQV
KRSKASWKGKQNNADFSAILNAYAPNEFVGYETTECCAKALGFFDSDFKEITEAKPNQEV
WVLLEKTPFYAEGGGAIGDRGALLKDNEEAAIVLDTKNFFGLNFSLLEIKKALKKGDQVI
AQVSDERLEIAKHHSATHLLQSALREVLGSHVGQAGSLVESKRLRFDFSHPKALNDEELE
KVEDLVNAQIFKHLPSQVEHMPLNQAKDKGALALFSEKYAENVRVVSFKEASIELCGGIH
VENTGLIGGFRIVKESGVSSGVRRIEAVCGKAFYQLAKEEHKELKNAKIALKNNDVMAGI
NKLKESVKNSQKAPVSMDLPVEKIHGVDLVVGVVEQGDIKEMIDRLKSKHEKLLAMVFKK
ENERITLACGVKNVPIKANAWANEVAQILGGKGGGRGDFASAGGKDIEKLQAALNLAKNT
ALKALEG
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgcaacgaatttttacaattttttcacaataaggggcatgctatttatcct
agcatgcctttagtgcctaatgacgctaccttgctttttaccaatgccggcatggtgcaa
tttaaagatatttttaccgggattgtgccacgccctagcattcctagagcgacaagctca
caattgtgcatgcgagcgggtggcaagcataacgatttggaaaatgtcggttataccgca
agacaccacacgctttttgaaatgctagggaatttctcttttggggattatttcaaagaa
gaagcgattttgtttgcgtgggaatttgtaaccaaaaatttagggtttaagcctaaagat
ttatatatcagcgtgcatgaaaaagacgatgaagccgttaaactatgggaaaagcttgtg
ccttttgacaggattaaaaaaatgggcgataaagataatttctggcaaatgggcgatagc
gggccttgcgggccttgcagtgaaatctacattgatcagggcgaaaaacactttaagggg
agcgaggactattttgggggcgagggcgataggtttttagaaatttggaatttggtgttc
atgcaatacgaacgctctaatgatggcgttttgtcccccttgccaaagcctagcattgat
acaggcatgggattagaaagggtgcaagcgctattagaacataagctcaataattttgat
tcttcattatttgcacccttaatggaagaaatcagcgagcttacaagcctagattatgcg
agcgagttccaaccaagctttagggtggtggccgatcacgcaagggcggtagcgtttttg
ctcgctcaaggggtgcatttcaataaggaaggccgtggctatgttttaaggcgcatttta
aggcgagccttaaggcatgggtatttaatgggcttgaaagaagcgtttttatacaaagtc
gtgggcgtggtgtgcgagcaattttctaacacgcatgcgtatttgaaagaatctaaagaa
atggtgctgaaagaatgctttgaagaagaagagcgctttttagaaactttggaatcgggc
atggaattgtttaacttgtctttagagcatttgaatgaaaataaaatttttgatggcaag
atcgctttcaagctttatgacacttttggttttcctttggatttaacgaacgacatgcta
agaagtcatggggcgtgcgtggatatgcaaggctttgaatcttgcatgcaagagcaagtg
aaacgctctaaagcttcatggaaaggcaaacaaaataacgctgattttagcgctatttta
aacgcttatgcgcctaacgaatttgtggggtatgaaacgacagaatgttgtgctaaagcc
ttagggttttttgatagcgattttaaagaaataacagaggcaaagcctaatcaagaagtc
tgggtcttattggaaaaaacccctttttacgctgagggtgggggggctataggcgatagg
ggtgcacttttaaaggacaatgaagaagcggctatagtgttggatacaaaaaactttttt
gggcttaatttttcactccttgaaatcaaaaaagcgctaaaaaaaggcgatcaagtgatc
gcgcaagtgagcgatgagcgtttagaaatcgccaaacatcatagcgcgacgcatttattg
cagagcgctttaagagaagttttaggctcgcatgtgggtcaagcagggagtttggtggaa
tccaaacgattgcgctttgatttctcgcaccctaaagcgctcaatgatgaagagctagaa
aaagtagaagatttagtcaatgctcaaattttcaagcacctacctagccaggtggaacat
atgcccttaaatcaggctaaagataagggagcgttagcgttatttagtgaaaaatacgct
gaaaatgtgcgggtggtgagttttaaagaagcgtccattgaattgtgtgggggcattcat
gtggaaaataccgggctgattggggggtttaggattgtaaaagaaagcggggtgagtagt
ggggtcagacgcattgaagcggtgtgcgggaaagccttttaccaactggctaaagaagaa
cataaagagcttaaaaacgctaagattgcattaaaaaataacgatgtgatggccggtatt
aacaagcttaaagagagcgtgaaaaacagccaaaaagcccccgtttctatggatttaccg
gttgaaaaaatccatggcgtggatttagtggtgggcgtagtggaacagggcgacattaaa
gaaatgattgaccgattgaaaagcaagcatgaaaaattgctcgctatggtgtttaaaaaa
gaaaatgagcgaataactctcgcatgcggggtgaaaaacgtgcccatcaaagcgaatgcg
tgggctaatgaagtggcgcaaattttagggggtaaagggggcggaagaggcgattttgcg
agcgctggaggcaaggatattgaaaaattgcaagccgcgctcaatttggcgaaaaatacc
gctcttaaagctttagagggatag
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