Helicobacter pylori 83: HMPREF0462_1263
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Entry
HMPREF0462_1263 CDS
T01915
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx03030
DNA replication
hpx03430
Mismatch repair
hpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0462_1263
03430 Mismatch repair
HMPREF0462_1263
03440 Homologous recombination
HMPREF0462_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpx03032
]
HMPREF0462_1263
03400 DNA repair and recombination proteins [BR:
hpx03400
]
HMPREF0462_1263
Enzymes [BR:
hpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0462_1263
DNA replication proteins [BR:
hpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0462_1263
DNA repair and recombination proteins [BR:
hpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0462_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
DUF7529
Motif
Other DBs
NCBI-ProteinID:
AEE70867
UniProt:
F4D2V1
LinkDB
All DBs
Position
complement(1275592..1276614)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDNYLKQRLPKAVFLYGEFDFFIHYYIQTISSLFKCDNPDTETSLFYASDYEKSQ
IATLLEQDSLFGGSSLVVLKLDFALHKKFKENDINLFLKALERPSHNKLIIGLYNSKSDT
TKYKYTSDTIVKLFQKSPLKDEAIHARFFIPKAWESLKFLQERANFLHLDISSHLLNALF
ETNNEDLSISFNDLDKLAILNAPITLEDIQELSSNAGDMDLQKLILGLFLKKSVLDIYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLMDAKEVLGYAPPKEIVENYAKNALRL
KETGYKRVFEIFRLWHIQSMQGQKELGFLYLTPIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggacaattatttaaaacaacgactccctaaagcggtgtttttg
tatggggagtttgatttttttatccattattatattcaaacgattagctcgctttttaaa
tgcgataaccccgacacagaaacttcgcttttttatgcgagcgattatgaaaaaagccag
attgcgactcttttagagcaggattctttatttggagggagcagtttagtcgttttaaaa
ctggattttgcgttgcataagaaatttaaggaaaatgacattaatctttttttaaaagct
ttagagcggcctagccataacaagcttatcatagggctttataattctaaaagcgacacc
acaaaatacaaatacactagcgatactatcgttaaacttttccaaaaaagccccttgaaa
gatgaagccatccatgcacgcttttttatccctaaagcgtgggagagtttgaaattctta
caagaaagggcgaattttttgcatttagacatcagcagccatcttttaaacgctcttttt
gaaaccaataacgaagatttaagcatttcgtttaacgatttagacaagctagcgatatta
aacgcgcccatcactttagaagacattcaagaattaagctctaatgcgggggatatggac
ttacaaaaactcattttagggctttttttgaaaaaaagcgtgcttgatatttatgattat
ttgttaaaagagggcaaaaaagatgcggatattttaagggggttagagcgctatttttac
cagctttttttatttttcgctcacattaaaacgaccggtttaatggatgctaaagaggtt
ttaggctacgctcctcctaaagagattgtagaaaattacgctaaaaacgccctgcgtttg
aaagagaccggctataagagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggaattgggttttttgtatttgactcccattcaaaaaatcatcaaccct
tga
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