Helicobacter pylori 26695: HP_0044
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Entry
HP_0044 CDS
T00008
Name
(GenBank) GDP-D-mannose dehydratase (rfbD)
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hpy
Helicobacter pylori 26695
Pathway
hpy00051
Fructose and mannose metabolism
hpy00541
Biosynthesis of various nucleotide sugars
hpy01100
Metabolic pathways
hpy01250
Biosynthesis of nucleotide sugars
Module
hpy_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
hpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
HP_0044
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HP_0044
Enzymes [BR:
hpy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
HP_0044
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
DUF5126
TPR_3
Motif
Other DBs
NCBI-ProteinID:
AAD07112
UniProt:
O24885
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All DBs
Position
42105..43250
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AA seq
381 aa
AA seq
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MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSDHKRRF
FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR
ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF
AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH
LMLQAPIPQDYVIATGKTTSVRDFVKMSFEFIGINLEFQNTGIKEIGLIKSVDEKRANAL
KLNLSHLKKGQIVVRIDERYFRPTEVDLLLGDPTKAEKELDWVREYDLKELVKDMLEYDL
KECQKNLYLQDGGYILRNFYE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaatcgctttaatcaccggggttaccgggcaagacgggagctatctggct
gaatacttgctgaatttgggttatgaagtgcatgggttaaaaaggcgctcttctagcatc
aacacttctaggatcgatcatctgtatgaagatttgcatagcgatcataaaaggcgtttt
ttcttacactatggggatatgaccgatagctctaatcttatccatttaatcgctaccact
aagcctacagagatttataatttagccgctcaaagccatgtaaaagtctcttttgaaacc
cccgaatacaccgctaacgctgatggtattggcacgctaaggattttagaagccatgcgg
attttaggattagaaaagaaaacgcgcttttatcaagccagcacgagcgaattgtatggc
gaagtcttagaaaccccgcaaaatgaaaacaccccctttaacccacgaagcccctatgcg
gtcgctaaaatgtatgccttttacatcaccaaaaattacagagaggcctataacttgttt
gcggttaatggcattctttttaaccatgagagcagggtaaggggcgaaacttttgtaacc
cgtaaaatcacacgagccgctagcgcgatagcgtataacttaacggattgcttgtattta
gggaatttagacgctaaaagagactgggggcatgccaaagattacgtgaaaatgatgcat
ttaatgctccaagcgcccatcccacaagattatgtgatcgccacaggaaagaccacaagc
gtgcgcgattttgtgaaaatgagctttgaatttatcggtatcaatttagaatttcaaaat
acagggattaaagaaatcggtttgattaaaagcgttgatgaaaaaagagcgaacgcttta
aaattgaacttaagccatttaaaaaaaggccaaatcgtggtgcgcatagacgagcgttat
ttcaggcctaccgaagtggatttgcttttaggcgatcccactaaggcagagaaagagcta
gactgggttagggaatacgatttaaaagagttggttaaggacatgttagaatacgattta
aaagaatgccaaaaaaacctttacttgcaagatgggggttatattttaaggaatttttat
gaatga
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