Helicobacter pylori 26695: HP_0183
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Entry
HP_0183 CDS
T00008
Name
(GenBank) serine hydroxymethyltransferase (glyA)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpy
Helicobacter pylori 26695
Pathway
hpy00260
Glycine, serine and threonine metabolism
hpy00460
Cyanoamino acid metabolism
hpy00630
Glyoxylate and dicarboxylate metabolism
hpy00670
One carbon pool by folate
hpy00680
Methane metabolism
hpy01100
Metabolic pathways
hpy01110
Biosynthesis of secondary metabolites
hpy01120
Microbial metabolism in diverse environments
hpy01200
Carbon metabolism
hpy01230
Biosynthesis of amino acids
hpy01240
Biosynthesis of cofactors
hpy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HP_0183
09102 Energy metabolism
00680 Methane metabolism
HP_0183
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HP_0183
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HP_0183
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HP_0183
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HP_0183
Enzymes [BR:
hpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HP_0183
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAD07252
UniProt:
P56089
Structure
PDB
PDBj
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All DBs
Position
190186..191436
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGIILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMVNQFPVYHQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctaccctaacaagcgc
tattatggaggctgtgaagtggtggataaaatagaaagcctagccatagaaagggctaaa
aagctttttaattgccagttcgctaacgtgcaagcgcattcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttggatggctatattgattatgaagaggcgctaaaaatcgctcaa
agcgttaagccagaaatcatcgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttactattaggcgatatagcccat
gtggcagggcttgtggtaaccggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggattattttaactaatgat
gaagagatagcggctaagattgacaaagcgatttttccaggaactcaaggcgggcctttg
atgcatgtgattgctgctaaagcggtgggttttaaagagaatctaaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttttggctaaagcgttaaaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggattttttagat
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggtgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggtcaatcaattccctgtgtaccaccaacctattttttaa
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