Helicobacter pylori 26695: HP_0247
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Entry
HP_0247 CDS
T00008
Name
(GenBank) ATP-dependent RNA helicase, DEAD-box family (deaD)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpy
Helicobacter pylori 26695
Pathway
hpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HP_0247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpy03019
]
HP_0247
03009 Ribosome biogenesis [BR:
hpy03009
]
HP_0247
Enzymes [BR:
hpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HP_0247
Messenger RNA biogenesis [BR:
hpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HP_0247
Ribosome biogenesis [BR:
hpy03009
]
Prokaryotic type
rRNA helicases
HP_0247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
P-loop_SecA
AAA_30
AAA_22
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AAD07315
UniProt:
O25029
LinkDB
All DBs
Position
255585..257063
Genome browser
AA seq
492 aa
AA seq
DB search
MELNQPPLPTEIDGDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRSSI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTPQHERARSFKKGQHRDRHP
KTNHYSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatggtgacgcttatcataagccg
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggcttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcacaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaagccctagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagattttcaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaagcaatgcgaattcattaagaaaaatccccaagtg
atgatcgctacaccaggaaggctgctcgatcacttaaaaaacgaacgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactacctccctagcgaagcgcagattttgcttttttcagcc
acgatgccagagccgattaaaagactagcggataagattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacaccgacatcacccaacgcttttatgtgatcaat
gagcatgagagggccgaagcgatcatgcgccttttagacacccaagcacccaaaaagagc
attgttttcacgcgcactaaaaaagaagccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcggcgctcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctacagatgtggcgagtcgtggg
ctagatattagcggtgtaagccatgtgtttaattaccacttgcccctaaacactgagagc
tatatccatcgcatcgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccctttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggatcatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagcaaaattggcttaaaccag
caagaaattgacgcgattcaaaaccctaaagaaaaaacgccaaaaccctctaacaaaaaa
acgccccaacatgagcgagcgcgttctttcaaaaagggtcagcacagagacagacaccct
aaaacaaaccattattctaaaaaacccaaacgccgttaa
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