Helicobacter pylori 26695: HP_0705
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Entry
HP_0705 CDS
T00008
Name
(GenBank) excinuclease ABC subunit A (uvrA)
KO
K03701
excinuclease ABC subunit A
Organism
hpy
Helicobacter pylori 26695
Pathway
hpy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HP_0705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpy03400
]
HP_0705
DNA repair and recombination proteins [BR:
hpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HP_0705
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HP_0705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
AAA_16
DnaJ_CXXCXGXG
AAA_21
APS_kinase
AAA_15
SLFN-g3_helicase
Viral_helicase1
AAA_23
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AAD07755
UniProt:
P56474
LinkDB
All DBs
Position
complement(757282..760089)
Genome browser
AA seq
935 aa
AA seq
DB search
MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY
ARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARVGEQFC
PTCLEPISSMSTSDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVD
GVMVRLDEEIHLHKTKKHTIEAVVDRVVVNNENASRIASAIEKALKESYGELEVEILQDN
APSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNT
PLNQGAIKVIFGYNRSYYAQMFEGFCEYNGIDSALCFNELNKEQQDALLYGNGTEISFHF
KNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKTCSSCEGHRLKASSLSVQVAGLKMADF
LTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLGRDARTI
SGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHD
KETIKHADFVVDIGPKAGRHGGEVVFSGSVKELLQNNHSTALYLNGTKKIERPKFELPKE
KHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSGSGKSSLILQTLLPTAQTLLNHAKKTQ
SLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKEAKILGYSAS
RFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGKSIADVL
NMSVEEAYEFFAKFPKIAVKLKTLMDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDT
GKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGNSMLVIEHNLDIIKNADYIIDMGPDGG
DKGGKVIASGTPLEVAQNCEKTQSYTGKFLALELK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcattattcaaggggctagggaaaacaatctcaaaaatatttttttagaa
atccctaaaaaccagtttgttgtttttaccggattgagcggttcgggtaaatccacttta
gcgtttgacactttatacgctgaaggccaaaggcgctatttagagagtttgtccagctat
gctaggcaatttttagacaaagtgggtaagcctaatgtggataaaattgaaggcctaacc
cctgcgatcgctattgatcaaaaaaccacttctaaaaaccccagatccactgtggggacg
atcactgaaatttatgattatttaaggttgttgtttgcaagggttggggagcaattttgc
cccacatgtttagagcctattagttctatgagcacgagcgatattatttctcaaatctgt
catttagaagaaaattctaaaatcattattctcgcccccattattaaagataaaaaaggt
tcgtttaatgataaattagagagcttgcgtttgaaggggtatgtgagggcttttgttgat
ggggtgatggtgcgtttagatgaagaaatccatttgcacaaaaccaaaaaacacaccatt
gaagcggtggtggatagggtggtagttaataatgaaaacgcttcacggatcgctagcgca
atagaaaaagcccttaaagaaagctatggggaattagaagtggaaatcttgcaagacaac
gcgccaagcatcagaaagcattacagcgaacataaggcatgctttaaatgcaagatgagt
tttgaagaattagagcctttgagtttttccttcaattcgcctaaaggggcgtgcgaaagt
tgcttgggtttggggacaaaatttagcctagatattagtaagattttagatcctaacacg
cctttaaatcaaggagcgattaaagtgatttttgggtataaccgcagttattacgctcaa
atgtttgaaggtttttgcgaatataatggcattgacagtgcactttgttttaacgaattg
aataaagagcagcaagacgctcttttgtatgggaatggcactgaaatcagctttcatttt
aaaaacagccctttaaaacgcccttggaaaggcatcattcaaatcgcttatgacatgttt
aaagagcaaaaggatttgagcgattacatgagcgaaaaaacctgttcttcgtgcgagggg
catcgtttgaaagcctccagtttgagcgtccaagtcgctggcttgaaaatggcggatttt
ttaactaagcccattgaagaagtttatcacttttttaatgatcccacgcattttagctat
cttaacgagcaagaaaaaaagatcgctgaacccattttaaaagagattttagaaagggtg
ttttttttatacgatgtggggttagggtatttgactttagggagggatgcgcgaacgatt
agcggaggggagagccaaaggatacgaatcgctagtcaaatcgggagtggtttgacaggg
gttttgtatgttttagacgagcctagcattggcttgcatgaaaaagatacgctcaaactc
attaacacccttaggaatttacaaaaaaaagggaacacgctcattgtcgtagagcatgac
aaagagacgattaagcatgcggattttgttgtggatattgggccaaaggctggaaggcat
gggggtgaagtggtttttagcgggagcgtgaaagaattattgcaaaataaccattctacc
gccttgtatctcaacggcactaaaaagattgagcgccctaaatttgaactccctaaagaa
aagcattttttagaaattaaaaatgtcaatatcaataacattaagaatttgagcgttcaa
atccctttaaaacaattggtgtgcattactggggtgagcgggagcggtaaaagctcgttg
attttacaaacccttttacccaccgctcaaacccttttaaaccatgctaaaaaaactcaa
agcttgaatggggtggagattgtagggttggagcatttggataaagtgatttatttagat
caagcccccataggcaaaaccccacgaagcaaccctgccacttacacgggagtgatggat
gaaatcaggattttatttgccgagcaaaaagaagctaaaattttaggctatagtgcgagc
cgttttagctttaatgttaaaggagggcggtgcgagaaatgccaaggcgatggggacatt
aaaatagaaatgcactttttgcctgatgtgttagtccaatgcgatagctgtaagggcgct
aaatacaacccccaaactttagaaatcaaggtgaaaggcaaatccattgccgatgtgttg
aacatgagcgtggaagaggcttatgaattttttgctaaattccctaaaatcgccgtgaag
ttaaaaacgcttatggatgtgggcttaggctatatcactttagggcaaaacgctacgact
ttaagtgggggggaggctcaaaggatcaaattagctaaagaattgagtaaaaaagacaca
ggcaaaaccctttatattttagatgagcctactaccggtttgcattttgaagacgtgaat
catcttttacaagtcttgcattctttagtggcgttaggcaattctatgctagtgattgag
cataatttagacattatcaaaaacgctgactacattatagacatggggcctgatgggggg
gataagggcgggaaagtcattgcgagcggcacgcctttagaggtggcgcaaaattgcgaa
aaaacccaaagctacacgggaaaatttttagctttggaattgaaatag
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