Helicobacter pylori 26695: HP_1478
Help
Entry
HP_1478 CDS
T00008
Name
(GenBank) DNA helicase II (uvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpy
Helicobacter pylori 26695
Pathway
hpy03420
Nucleotide excision repair
hpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HP_1478
03430 Mismatch repair
HP_1478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpy03400
]
HP_1478
Enzymes [BR:
hpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HP_1478
DNA repair and recombination proteins [BR:
hpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HP_1478
MMR (mismatch excision repair)
Other MMR factors
HP_1478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
RNase_H_2
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AAD08516
UniProt:
O26013
LinkDB
All DBs
Position
complement(1549611..1551659)
Genome browser
AA seq
682 aa
AA seq
DB search
MMDFEKSILDHLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTL
TLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSD
EVKTLCKQLKISNFRASISQIKNGMMDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFL
SLKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYG
FRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSH
KSVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYR
LIGALSFYERAEIKDALAFMHLVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGL
NLEEALKLGAFKDKLNPKNEYALKQFIAMIGRLREAFEISVEEFCSRFLEETNLLKSYEK
EDNYEEREGFVKELLTLVKEYFKTNPTHSLLDFLNESVLDAHNTENAQKVSCMSVHMSKG
LEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKI
SCSPSVFLEEAQLLNQDNPPKQDHQKDAPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKI
NCGGNVYDKISEKFVEKVDNGF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgaaaaaagcattttagaccatttaaacggagcgcaaaaaatcgctgca
agccacattcaagggccattgctcattttagcgggagctgggagcggtaagactaagact
ttaacgagccgtttagcgtatttgattggcgtttgtggcgtgcctagcgagaacacttta
acgctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttg
aaaaaccaagcccttatcccccccttgctttgcactttccatcgttttggtttgctgttt
ttaaggcaacacatgaatcttttaaaaagggcatgcgatttttcggtattagatagcgat
gaagtcaaaacgctgtgcaaacagctcaaaatttcaaactttagagccagtatttctcaa
atcaaaaacggcatgatggatttgagcatgcaagatagcgaatgctataaagcgtatgag
ctttatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgcttttttta
agccttaagattttacaagataatgaaaccatcgccaaagagactagcgagcgctaccac
tacattatggtagatgagtatcaagacacgaacgccttgcaattggagtttttaaaaaaa
ttgagtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggg
tttaggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaa
atagtgaaattagagaccaactaccgctctagcgctgaaattttagcgtgcgctaattct
ctcatcagccacaaccaacaccgccatattaaaacgcttcaaagtttcaaaggctcgcat
aaaagcgtggtttgtaaagaatatttgacgcaaaaagaagagagcctggatgtggcttat
caaatcaaagcccttttaaagaagggcgagaatttagaaaatatcgctattttgtatcgc
ttaaacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccttatagg
ctcattggggcgctgagtttctatgaaagagccgagattaaagacgctttggcgttcatg
catttagtggctaaaaaagacgatcgcttttttattaagcgcgttttaaacaagccccca
agaggtcttggcaagatcactcaagaatggattttttctcttttagatgaagagggtttg
aatttagaagaggcgctaaaacttggggcgtttaaagacaaattaaaccctaaaaacgaa
tacgctttgaaacaatttatcgctatgatagggcgtttgagggaggcttttgaaatttca
gtagaggagttttgctctcggtttttagaagagactaaccttttaaaaagctatgaaaaa
gaagacaattacgaagaaagagagggctttgttaaagagcttttaaccttagtgaaagaa
tattttaaaactaaccccacgcattctttactggattttttgaatgaaagcgtgctggat
gcccataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaaggga
ttagagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcataggggg
ttcaatcaggaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagg
gctaaagaagaattgcagctctcttatgtgaaagagcgttcgtattttgggaggaaaatt
tcttgctcgccctctgtgtttttagaggaagcccagttgctcaatcaagacaacccccct
aaacaggatcatcaaaaagacgcgcccattaaagtgggggacttgattaggcataagatt
tttggcactgggagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatc
aattgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataac
gggttttga
DBGET
integrated database retrieval system
