KEGG   Helicobacter pylori Aklavik117: HPAKL117_00075
Entry
HPAKL117_00075    CDS       T02352                                 
Name
(GenBank) type IV secretion system protein VirB4
  KO
K12053  ComB4 competence protein
Organism
hpya  Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:hpya00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpya02044]
    HPAKL117_00075
Secretion system [BR:hpya02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPAKL117_00075
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 nSTAND3 AAA_29 TraG-D_C RsgA_GTPase AAA_10 AAA_22 AAA_23 ABC_tran DUF5727 AAA_7 ResIII PduV-EutP T2SSE nSTAND_NTPase5 CbiA AAA_16 SMC_N Mg_chelatase
Other DBs
NCBI-ProteinID: AFX90436
LinkDB
Position
14005..16368
AA seq 787 aa
MLEKLLSAVKQKVSNYFLGVLPKSYSMSEENNILGLYDEHFLLTKNENLVGILRLEGVSY
THLSTEQLQDLFTERQIALDSLEKVVARLVVKRRKIDHQQNIQSDSKYLQAILNQFENKE
VYENQYFLVLESAHSLQGVLEHKKKSLMHANRENFKDILSYKAHFLQETLKSLEIQLKNY
APKLLSSKEVLNFYAEYINGFDLPLKPLVGGYLSDSYIASSTTFEKDYFLQESFNQKTYN
RLIGIKAYESERITSIAIGALLYQETPLDIIFSIEPMSVNKTLSFLKERAKFSMSNLVKN
ELLEYQELVKTKRLSMQKFALNILIKAPSLEDLDAQTSLVLGLLFKENLVGVIETFGLKG
GYFSFFPERIHLNHRLRFLTSKALACLMVFERQNLGFKANSWGNSPLSVFKNLDYSPFLF
NFHNQEVSHNNAKEIARVNGHTLIIGATGSGKSTLISFLMMSALKYQNMRLLAFDRMQGL
YSFTKFFKGHYHDGKSFSINPFCLEPNLQNLEFLQSFFLSMFDLAPSRDKEALEDMNAIF
SAIKSLYETLYPKAFSLLDFKETLKRTSSNQLGLSLEPYLNNPLFNALNDALNSSAFLNV
INLDTITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNTKINALIT
QARKANGVVVLALQDIYQLSGVKNAHSFLSNMGTLILYPQKNARELKHHFNVPLSETEIS
FLENTPLYARQVLVKNLGNGSSNMIDVSLESLGRYLKIFNSDSSHVNKVKALQKDYPKEW
REKLLKS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgttagaaaagcttttgagcgctgtcaaacaaaaagtttcaaactattttttaggggtt
ttgcctaaaagctattctatgagcgaagaaaacaacattttaggattgtatgatgagcat
ttcttgctcactaaaaacgaaaacttagtgggcatcctccgtttagagggggtgagttac
acccatttaagcacagagcaattgcaagatcttttcaccgagcgccaaatagcgttggat
tctttagaaaaagtcgtggcgcgccttgtggttaaaaggcgtaaaattgatcaccaacaa
aacattcaatctgattctaaatacttgcaagcgattttgaatcaatttgaaaataaagaa
gtgtatgaaaatcagtattttttagttttagaaagcgcgcactctttacaaggcgtttta
gagcataagaaaaaatctcttatgcatgccaatagggaaaattttaaggacatcctctct
tataaagcgcattttttgcaagaaactttaaaaagcttagaaatccagctcaaaaattat
gcccccaaactcttaagctccaaagaggttttgaatttttatgcggaatacattaacggg
tttgatctccctttaaagcccctagtaggggggtatttgagcgatagctatatcgctagt
tctaccacttttgaaaaagattatttccttcaagaaagctttaatcaaaaaacctataac
cgcttgattggcattaaagcttatgagagcgagcgcatcacttctatagcgatcggagcg
cttttataccaagaaacgcccctagacattatcttttctatagagcctatgagcgtcaat
aaaacgctgagttttttaaaagagagggccaaatttagcatgtccaatctcgttaaaaac
gagctattagaataccaagaactggtcaaaaccaaacgcctatccatgcaaaaattcgcc
ttaaacattcttatcaaagcccctagtttagaggatttagacgctcaaacaagcttagtt
ttagggcttttatttaaagaaaatctagtgggcgttatagaaacttttggcttgaaaggg
gggtatttttcttttttccctgaacgcatccacttaaaccaccgcttgcgttttttgacc
tctaaagccctagcgtgtttaatggtgtttgaaaggcaaaatttaggttttaaggccaat
tcatgggggaatagccctttgagcgtgtttaaaaatttggattattccccttttttattc
aatttccacaaccaagaagtgagccacaacaacgctaaagaaatcgccagagtgaatggg
catactctaatcataggggctaccgggagcggtaaaagcacgctgattagctttttaatg
atgagcgctttgaaataccaaaacatgcgccttttagcatttgataggatgcaagggctg
tattctttcacaaaattttttaaagggcattaccatgacggcaaatcttttagcatcaac
cccttttgtttagagcctaatttgcagaatttggaatttttgcaatccttctttttaagc
atgtttgatcttgccccttcaagggataaagaagccttagaagacatgaatgcgattttt
agtgcgattaagagcctttatgagactttataccctaaagcttttagtttgctagatttt
aaagaaacgcttaaaagaacctcatctaaccaattgggcttgagtttagagccgtatttg
aataaccccctttttaacgctttgaatgacgcgctcaattctagcgcttttttaaatgtg
ataaacctagacaccatcacccaaaaccctaaagacttagggcttttagcctattatttg
ttttataaaatcttagaagaatccaggaaaaacgacagcggttttttggtttttttagac
gagtttaaatcctatgtggaaaacgatttattgaatactaaaattaacgctttaatcacg
caagccagaaaggctaatggcgtggtggtgttggctttgcaagacatttaccaattaagc
ggggttaaaaacgctcatagttttttgagcaacatggggactcttattttgtatccgcaa
aaaaacgctagggagttgaaacaccacttcaatgtgcctttgagcgaaactgaaatttct
tttttagaaaacacccctttgtatgccaggcaggttttagtcaaaaatctgggtaacggg
agttctaacatgattgatgtgagcttggaaagtttagggcgttatttgaaaatctttaat
tcagactctagccatgtgaataaagtgaaagcgttacaaaaagactatcccaaagagtgg
cgtgagaaacttttgaagagttag

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