Helicobacter pylori Aklavik117: HPAKL117_00915
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Entry
HPAKL117_00915 CDS
T02352
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya00260
Glycine, serine and threonine metabolism
hpya00460
Cyanoamino acid metabolism
hpya00630
Glyoxylate and dicarboxylate metabolism
hpya00670
One carbon pool by folate
hpya00680
Methane metabolism
hpya01100
Metabolic pathways
hpya01110
Biosynthesis of secondary metabolites
hpya01120
Microbial metabolism in diverse environments
hpya01200
Carbon metabolism
hpya01230
Biosynthesis of amino acids
hpya01240
Biosynthesis of cofactors
hpya04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPAKL117_00915
09102 Energy metabolism
00680 Methane metabolism
HPAKL117_00915
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPAKL117_00915
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPAKL117_00915
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPAKL117_00915
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPAKL117_00915
Enzymes [BR:
hpya01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPAKL117_00915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
HrcA
Motif
Other DBs
NCBI-ProteinID:
AFX90600
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Position
184488..185738
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEVLKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVAGEHANPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFITSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttgggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttagatggctatattgattatgaagaggtgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttactattaggcgatatagcccat
gtggcagggcttgtggtagccggtgagcatgctaatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcaattgctgctaaagcggtagggtttaaagagaatctaaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttttggctaaagcactacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagac
aagccttatagcgggaaagatgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgtagcccttttataacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaagaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccagtcaattccctgtgtatcaacaacctattttttaa
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