Helicobacter pylori Aklavik117: HPAKL117_01125
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Entry
HPAKL117_01125 CDS
T02352
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hpya
Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_01125
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPAKL117_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
AAA_24
NTPase_1
RecA
AAA_14
AAA_16
Rad51
ATPase_2
AAA_31
ABC_tran
SLFN-g3_helicase
NACHT
nSTAND3
AAA_22
CbiA
AAA_30
DAP3
AAA_5
GvpD_P-loop
LexA_DNA_bind
ArsA_ATPase
zf-C2H2_7th_ZNF462
NPHP3_N
ResIII
Zeta_toxin
DUF7129
AAA
SRP54
MeaB
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFX90640
LinkDB
All DBs
Position
224356..225702
Genome browser
AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQTQKEVLNALKNPIPKAQKSVSI
AEIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRNIAVFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPNQKTSIKCYEANAVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgaatgtcagcattgcggttttacaagccctaagtgg
ctaggaaagtgcgttcaatgcaacgcatgggaaagttttatagaattgaaccaaacccaa
aaggaagttttaaacgcgcttaaaaacccgatcccaaaagcgcaaaaaagcgtttctatc
gctgaaattgagcatgaagaagtgatcaaattttcttccactcaaagcgagttggatatt
gttttgggtggggggatcgctaaaggggggttgtatttggtgggggggagtcctggggtg
gggaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccaccagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggcgaat
attgaaagcgaaaattattttgcttgcgtgattgattccattcaaacgctttattcgcca
gagatttcttcagcgcccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttagccaaaacaagaaatattgctgtttttatcatcggtcatatcactaaagaaggg
agcattgcagggcctagagtgttagagcatatggtggatagcgtgctgtattttgaaggc
gatcccagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgagatgaaagagcagggtttagtgagcgctaaagaagcttcaagt
ttgtttttttccaaagaagagcctatggaggggagtgcgattaccatcactttagaaggc
tcaagggcgttgattttagaaatccaggcgttggtgagcgagtgcagttttggagcgccc
aaacgattagcgaacgggtttgacaccaaccgccttaacatgctcatcgctttattagaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcggagggatt
aagattagcgagccggcttgcgatttagcggtcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggcgaagtgagtttgaatggtaggatt
ttagaagcccctaatttgaacgccagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcctaaaaaacctaatcaaaaaacctcgatcaaatgctatgaagccaatgcg
gtgggtaagattgttgaatggatgtga
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