Helicobacter pylori Aklavik117: HPAKL117_01140
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Entry
HPAKL117_01140 CDS
T02352
Name
(GenBank) putative Outer membrane protein
Organism
hpya
Helicobacter pylori Aklavik117
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
CREPT
Motif
Other DBs
NCBI-ProteinID:
AFX90643
LinkDB
All DBs
Position
complement(228359..230446)
Genome browser
AA seq
695 aa
AA seq
DB search
MKIKKSLLLSLSLMASLSRAEDDGFYMSVGYQIGEATQMVKNTGALRNLADKYDNLSNLL
NQYNYLNSLVNQANTPTAITSAIGNLSSSATNLTSATTTSPAYQAVALALNAAVGMWQVI
AFGISCGPGPNLGTEHLENGGVRSFDNTPNYSYNTNSGTTTTTCNGASNVGPNGILSSSE
YQTLNTAYQTIQTALNQSQGGGMPALNGSKKMVVNINQTFTRNPTTENTYPDGNGNYYSG
GSAIPIQLKFNSVNDAENLLQQAATIINVLTTQNPHVNGGGGAWGFGGKTGSVMDIFGPS
FNAINEMIKNAQAVLEKTQQLNANENTQITQPENFNPYTSKDKGFAQEMLNRANAQAEIL
NLAQQVANNFHSIQGPIQQDLEECLAGSAGVINDNTYGSGCAFVKETLNSLEQHTAYYGN
QVNQEKALAQTILDFKGALNTLNNDQKAINSGISSLPNAKSLQNMTHSTQNPNSPEGLLT
YSLDSNKYNQLQATTQELGKNPFRRFGMISSQTNNGAMNGIGVQMGYKQFFGQKRNWGLR
YYGFFDYNHAFIKSSFFNSASDVWTYGVGMDALYNFINDKNTNFLGKNNKLSVGLFGGIA
LAGTSWLNSEFVNLNVVGNIYSAKMNVANFQFLFNLGLRMNLARPKKKDSDHVAQHGVEL
GVKIPTINTDYYSFMGTELKYRRLYSVYLNYVFAY
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaaaaatccctcttgctctctctttctctcatggcttcattatcaagggct
gaagatgacggattttatatgagtgtgggctatcaaatcggtgaagccactcaaatggtg
aaaaacacaggagcgttgcgaaaccttgcggacaaatacgataacttaagcaacctttta
aaccaatacaattacttaaactccttagtcaatcaagccaacacgcccaccgcgatcaca
agcgcgattggtaatttaagctcaagcgcgacgaatttaaccagcgctaccaccacttcc
ccagcctatcaagccgtagctttagcgctcaatgcggctgtgggcatgtggcaagtcata
gcttttggtatcagctgtggtcctggccctaatcttggcacagaacatttagaaaatggg
ggcgttcgatcgtttgacaacacaccaaactacagctacaacactaatagcggaacgacc
accaccacttgcaatggagctagcaatgtagggccaaatggtatcctatctagtagtgaa
taccagactctcaataccgcttatcaaactatccaaaccgctttaaaccagagtcaaggg
ggcggaatgcctgccttgaacggctccaaaaaaatggtagtcaatatcaaccaaactttc
acaagaaaccctaccacagaaaacacttaccccgatggaaatggcaattattattcaggc
gggtctgcaatcccaatccagctaaagtttaacagcgtcaatgacgctgaaaaccttttg
caacaagccgctactatcatcaatgtccttaccactcaaaacccgcatgtgaatggtggc
ggtggggcatgggggtttggcggtaagactgggagtgtgatggatatttttggcccttct
tttaatgcgattaacgagatgattaaaaacgctcaagccgttttagaaaaaacccaacag
cttaacgctaatgaaaacactcaaatcacgcaaccagaaaatttcaacccctacacttct
aaagacaaagggttcgctcaagaaatgctcaacagagcgaacgctcaagcagagatttta
aatctagcccaacaagtagcgaacaatttccacagcattcaagggcctatccaacaagat
ctggaagaatgtttggcaggatcagctggtgtgattaacgacaacacttatggttcaggt
tgcgcgtttgtgaaagaaaccctcaattctttagagcaacacaccgcttattacggcaac
caggtcaatcaagagaaagctttggctcaaaccattttggattttaaaggagcccttaac
actttaaacaacgaccaaaaagcgatcaatagtggcatctctagcttgcctaacgctaaa
tctcttcaaaacatgacgcattccactcaaaaccccaattccccagaaggtttgctcact
tattctttggattcaaacaaatacaaccagctccaagccaccacgcaagaattaggcaaa
aaccctttcaggcgctttggcatgattagttctcaaactaataacggcgcgatgaatggg
atcggcgtgcaaatgggttacaaacaattctttggtcaaaaaaggaattgggggttaagg
tattacggcttttttgactataaccatgcgttcatcaaatctagctttttcaactccgct
tctgatgtttggacttatggggtaggcatggatgcgctttataacttcattaacgataaa
aacaccaactttttaggcaagaataacaagctctccgtggggctttttggcgggattgcg
ttagctgggacttcatggcttaattctgaatttgtgaatttgaatgtggtgggcaatatc
tatagcgctaaaatgaatgtggcgaatttccaatttttattcaatttaggcttgagaatg
aatctcgctaggcctaagaaaaaagacagcgatcatgttgcgcagcatggcgtggaatta
ggcgtgaaaatccctaccattaacacggattattattctttcatgggcactgaactcaaa
tacagaaggctctatagcgtgtatttgaattatgtttttgcctattaa
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