Helicobacter pylori Aklavik117: HPAKL117_01340
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Entry
HPAKL117_01340 CDS
T02352
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hpya
Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpya03016
]
HPAKL117_01340
Enzymes [BR:
hpya01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HPAKL117_01340
Transfer RNA biogenesis [BR:
hpya03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HPAKL117_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AFX90683
LinkDB
All DBs
Position
270076..271380
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AA seq
434 aa
AA seq
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MKVYIETMGCAMNSRDSEHLLSELSKLDYKETSDPKAADLILINTCSVREKPERKLFSEI
GQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI
DYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLA
NNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDAF
LERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIV
GFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNR
HKEILEEKARLEMGKTHVVLVENRREINNQIVGFEGRSDTGKFIEVACKEKRNPGELVRV
EIISHSKGRLIATA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtttatattgaaacaatgggttgcgctatgaactctagggatagcgagcattta
ttgagcgagctttccaaactagactataaagaaactagcgaccctaaagcagcggatttg
attttaatcaacacttgcagcgtgcgcgaaaagcctgaacggaaattgttttcagaaatc
ggtcaattcgctaaaatcaaaaaacccaacgccaaaatcggggtttgcggttgcaccgca
agccacatgggagcggatattttgaaaaaagccccgagcgtgagctttgtgttaggggct
aggaatgtgtctaaaatctctcaagtgatccataaagaaaaagccgttgaagtggcgatt
gattatgatgaaagcgcgtatgcgtttgaattttttgaaaaaaaggctcaaatcagatcg
ttactaaatatttctataggttgcgataagaaatgcgcttattgcattgtcccgcacact
agggggaaagaaatttctatccctatggatttgattttaaaagaagctgagaaattggca
aataacggcactaaggagctcatgcttttagggcagaatgtgaataattacggcgcgcgt
ttcagcagcgagcatgcgaaagtggattttagcgatttgttggataaattgagcgaaatc
caggggattgaaaggatacgattcacttcgcctcaccccttgcacatgaatgatgcattt
ttagagcgctttgccaaaaaccctaaagtgtgtaagagtatccacatgcctttacagagc
ggatctagcgcggtgttaaagatgatgcgaagaggttatagtaaggagtggtttttaaat
agggtggagaggttaaaagcgttagtgcctgaagtgggcattagcacggatattatcgta
ggctttcctaatgagagcgataaggattttgaagacacgatggaagtgctagaaaaagtg
cgctttgacacgctctatagtttcatttattccccacgccctttcactgaagcgggagct
tggaaggaaagagtgcctttagaggtttcatcttcaaggctagagaggttgcaaaacagg
cacaaagaaattttagaagaaaaagccaggctagaaatgggtaaaacgcatgtggtgttg
gtggaaaataggcgtgaaattaataatcaaatcgtgggttttgaagggcgtagcgatacg
gggaaattcattgaagtagcgtgtaaagaaaaaagaaatccgggcgagcttgtaagagtg
gagattatctctcattccaaagggcgcttgatagcgaccgcttaa
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