Helicobacter pylori Aklavik117: HPAKL117_02245
Help
Entry
HPAKL117_02245 CDS
T02352
Name
(GenBank) VirD4 coupling protein
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPAKL117_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Dsl1_C
Motif
Other DBs
NCBI-ProteinID:
AFX90864
LinkDB
All DBs
Position
complement(464423..466681)
Genome browser
AA seq
752 aa
AA seq
DB search
MKMQFVKAFCVLFSILLIPLFFILANYYTFDALKSFRQAYFFSQSVFVGLYKGASILDLK
FEVYITMIMSLMPLVATIYMSIQKTKETSHGYARWANSKDIECFKIFSKEGFCKVVHRLG
VQFDNGFILGKFGFPKLRDVCYDKPLGAMIVAPPGAGKTACVALPNLLTLPNSCIITDIK
GELRDKTAGYRQKFLNNRILIFNPYGDDNTCYFNPFDKRIVKPMNFDQRLRLVQENANNV
FISEEKGEDHWVSKAKDLFSFYALYDVCSKDETNFFDVAMGPNRDYVNLIDKRSRYYKQL
YQHDKKTGEIILDPQTNEPILIPNVNARKLWYLQVSEQKYVDPKDPRNFDTNEPEPAPRS
EGALDEIVRNDARAWANSAEEEFASIISTFNRFVSVFKSNQVRIATSKMSFDYEELRTDN
ISLYIVIAQKDINTLAPLVRVILESIAKNLLTNESSKKEERIYMILDEFVRFGKLPFLLE
MPALCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVG
EFTRQSKNYSTEKGQLVFGGSSSYSHEGRNLLTAQDIMNIESDEVIVIVTGAKATPLKLK
ANYWFKDKELLKRANLPIDLEVERRRVEEPTQPTTEITTPPNQNKANLDQSNKGENTENK
DNESKTNENNPTIPQKESENSNLTESEKDHENPTTSQEKSKNENTEQENDETDEILKKPL
NEMNTEEKRALFKKMQQGDEESEQEVLQDTQS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcaatttgtgaaagctttttgcgtgctttttagcattttacttatcccctta
ttttttatcttggcaaattactacacttttgatgccttaaaatcatttagacaagcttat
tttttctctcaaagcgtgtttgtagggctttataagggagcgagtatcttagatttaaaa
tttgaagtctatatcactatgataatgtctttaatgcccttagtagctacgatttatatg
agtattcaaaagactaaagaaacttcgcatggctatgcgagatgggctaatagcaaagat
atagaatgttttaaaatttttagtaaagagggcttttgtaaggtagtccatagattaggg
gtgcaatttgataatggctttattctaggaaaatttggttttccaaaacttagagatgtg
tgttatgacaagcctttaggagccatgattgttgcaccacccggagctggtaaaaccgca
tgcgtggctttaccaaatctattgaccttgcctaatagctgtattatcaccgatattaaa
ggcgaattaagagataagactgcaggctatagacaaaaattcttaaacaataggatttta
atctttaatccttatggtgatgataacacttgctattttaatccttttgataaaaggatt
gtaaaacccatgaactttgaccaacgcctaaggcttgttcaagaaaatgccaataatgtc
tttattagcgaagaaaaaggcgaagaccattgggtatctaaagctaaagatttgtttagt
ttttatgccttgtatgatgtttgttccaaagatgaaacaaacttttttgatgtcgctatg
ggtccaaatagagattatgttaatttgattgacaaaagaagccgttattacaaacaactc
tatcaacacgataaaaaaacaggcgaaattatcctagacccacaaactaatgagcctatt
ttaatccctaatgtgaatgcgagaaaattatggtatttgcaagtttcagagcaaaaatac
gtcgaccccaaagaccctagaaattttgacaccaatgagcctgaaccagcccctagaagt
gaaggggcattagatgaaattgtaagaaatgatgcaagagcttgggctaatagtgctgaa
gaagaatttgcaagtatcatttctacctttaatcgctttgtgtctgtttttaagagcaat
caagtaagaattgctacttctaaaatgagctttgattatgaagaattaagaacggacaat
attagtctttatattgttattgctcaaaaagatattaacacgcttgctcccttagttaga
gtgattttagaaagcattgctaaaaacttattaactaatgaaagctctaaaaaagaagaa
cgcatttatatgattttagatgaatttgttagatttggtaagttgcctttcttattagaa
atgccagcattgtgtcgttcttataatgttgtccccttattcatcacacaagattatgcg
atgattagaaaatattatagcgatgatgatttgaaaatcttaaaaggcgtggtgcattat
aacattgtctttaagatgaatagcgctgaagatgctgagattgtctctaaggaagtgggc
gaatttaccagacaatctaaaaactattctactgaaaagggtcagctagtctttggaggt
agttcttcttatagccatgagggtagaaacttactcacagcccaagacattatgaatata
gaatcagatgaagtcattgtaattgttacaggggctaaagcgacccctttaaaacttaag
gctaattattggttcaaagataaagagcttttaaaaagagctaatttgcctattgattta
gaagtagaaagaagaagagttgaagagcctacgcaacccactacagaaattacaacgccc
cctaatcaaaacaaagctaacttagatcaaagcaataagggggaaaacacagaaaataag
gataatgagagcaagaccaacgagaataatcccactataccacaaaaagagagtgaaaat
tcaaatctaacagaaagcgagaaagaccatgaaaaccccactacttcacaagaaaaaagc
aagaatgaaaacacggagcaagaaaatgatgagactgatgagattttaaaaaagccactc
aatgaaatgaacacagaagaaaaaagagccttgtttaagaaaatgcaacaaggcgatgaa
gaaagcgaacaagaagttctacaagacacccaaagttaa
DBGET
integrated database retrieval system
