Helicobacter pylori Aklavik117: HPAKL117_02475
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Entry
HPAKL117_02475 CDS
T02352
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya00470
D-Amino acid metabolism
hpya00550
Peptidoglycan biosynthesis
hpya01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPAKL117_02475 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPAKL117_02475 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpya01011
]
HPAKL117_02475 (murD)
Enzymes [BR:
hpya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HPAKL117_02475 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpya01011
]
Precursor biosynthesis
Amino acid ligase
HPAKL117_02475 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
AFX90908
LinkDB
All DBs
Position
514037..515305
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AA seq
422 aa
AA seq
DB search
MKISLLGHGKTTLALGRFFRKNHNEVKFFDDQFTSSFKDREGFVCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYIDSLFDLVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVEADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDKSEEVLERLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKKLNAFKIGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYEVSLYAIGSSASIIQ
ALALEFNVSCQVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGEKFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttattggggcatggcaaaaccactctagccttagggcgtttttttaga
aaaaaccataacgaagtcaaattttttgacgaccaattcacttcatcttttaaagataga
gagggttttgtttgctatcccagtaaggatttcaaccctaatgattcccaattagagata
gtcagccctggcattagtttcacgcaccctttagtgataaaagccaagcatttagtgagc
gaatacgattatattgatagcttgtttgatttggttttcacgcccactataataagtatt
agcggcactaatggtaaaaccaccacgacagaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaagcaatcg
cccttgtgggtgctagaaacaagctccttttctttgcattacaccaataaggcttaccct
ttaatctacttgctcatcaatgtggaagctgatcatttgacctggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaattcgcaagcgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagcgtttaaaaatcccttctaacgccctttttttt
aaaggagcgtttttattagacgctgccttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgctcttaaaaaactgaacgctttt
aaaatcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaatattgatgccaccttgcaagccctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaattatgaagtaagcctttatgcgataggatcaagcgcttctatcatccaa
gccttagcgttagaatttaatgtttcttgtcaggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttccccaagcgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaaaatttaaagcgtttgtttta
aaagattaa
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