Helicobacter pylori Aklavik117: HPAKL117_03080
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Entry
HPAKL117_03080 CDS
T02352
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPAKL117_03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_03080
Enzymes [BR:
hpya01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPAKL117_03080
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPAKL117_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFX91027
LinkDB
All DBs
Position
644137..644715
Genome browser
AA seq
192 aa
AA seq
DB search
MGETYTNINLNKPQNKPLNKQVYEGIENCNLCKRHQHSKPVIGLFNPTSKLTFITLTPML
DSQLNFLNNLKAAMLESIIQKVFNCPLKDCSILSLLKCDSNSLNLEEEINACLFHLTWQL
DNSASKVIVVFGEILPKRLLNLSKEESFGRIVSLKTKHFLSTHALEDMLKNPTLKKEALA
HFKIALQFLNQS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgaaacttacaccaatatcaaccttaataagccccaaaataagccccttaacaaa
caagtttatgagggcatagaaaattgcaatctgtgcaaacgccatcaacattcaaaaccg
gtgattgggctttttaaccccacttccaagctcactttcatcacgctaacccccatgcta
gatagccaattgaatttcttaaacaatttaaaagcggccatgttagagagcattatccaa
aaagtttttaactgccccttaaaagattgcagtattttatcgctccttaaatgcgactct
aacagccttaatttagaagaagaaatcaacgcatgcctatttcatttaacctggcaatta
gataacagcgcttcaaaagtcattgtggtatttggcgagattttgcccaaacgcctttta
aacctttctaaagaagaatcttttgggcgcatcgtgtctttaaaaacaaaacatttttta
agcacccatgctttagaggacatgctcaaaaaccccacgctcaaaaaagaagcgttagcg
cattttaaaatagcgctccaatttcttaaccagtcttaa
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