Helicobacter pylori Aklavik117: HPAKL117_04005
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Entry
HPAKL117_04005 CDS
T02352
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hpya
Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpya03032
]
HPAKL117_04005
03036 Chromosome and associated proteins [BR:
hpya03036
]
HPAKL117_04005
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_04005
DNA replication proteins [BR:
hpya03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HPAKL117_04005
Chromosome and associated proteins [BR:
hpya03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HPAKL117_04005
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HPAKL117_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFX91203
LinkDB
All DBs
Position
830409..830693
Genome browser
AA seq
94 aa
AA seq
DB search
MNKAEFIDLVKEAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKE
GKVPGSNKTYKTEDKRVPKFKPGKILKQKVEEGQ
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggaatttattgatttagttaaagaagcgggcaaatacaacagcaaaaga
gaagccgaagaagcgatcaatgcctttactctagcggtagaaacagctttaagcaagggt
gaaagcgtggaattggttggttttggcaaatttgagaccgcagagcaaaaaggcaaagaa
ggtaaagtgccaggaagcaataaaacttataaaactgaagacaagcgagtgcctaaattc
aaacccggcaaaatccttaaacaaaaagttgaagaaggccaataa
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