KEGG   Helicobacter pylori Aklavik117: HPAKL117_04060
Entry
HPAKL117_04060    CDS       T02352                                 
Name
(GenBank) type I restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpya  Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:hpya00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpya02048]
    HPAKL117_04060
Enzymes [BR:hpya01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HPAKL117_04060
Prokaryotic defense system [BR:hpya02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPAKL117_04060
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: AFX91214
LinkDB
Position
complement(839742..842741)
AA seq 999 aa
MNYEIIAENNESTVMAEYHSDNEKKGAYESEAELERAFIALLQKQGYEFKKIHKEQELKD
NLKEQLEKLNDHYFTPKEWDTLYSQFIASKNDDYKAKTRKIQEDPIFNLTLENGKTKNIK
IIDKKNIHKNALQVIHQYSTKGKYENRYDVSILVNGLPLVHVELKRRGVAIREAFNQIKR
YKRDSFSAEDGLFDFVQIFVISNGTSSKYYSNTTRIAQLEKNHKADTFEFTNYWADSKNH
NIEDLMDFARSFFAKRSLLNVLTRYCVFTSDEVLLVMRPYQIVAAERILEKIKTAQNSKT
YGKNQSGGYIWHTTGSGKTLTSFKSAVLAKELESISKVLFVVDRKDLDYQTMKEYDKFQK
DCANSNTSTKILKEQLENPNAKIIITTIQKLDKFVKSHLKGHAIFNEEVVMIFDECHRSQ
LGSMHQAITKAFKKYHLFGFTGTPIFAQNCDKNNPLGTTEQKFGKCLHQYTIIDAIRDKN
VLPFRVEYHNTIKAKEGIIDNKVRAVDEKNALLDTRRIKEITKCILERFNQATKNKKFNS
ILACSSIEALKKYYLAFKEEKHDLKIATIFSYSANEDFDALEDENNESANGLDKSSRDFL
EGAIADYNGMFKTSFDTSDQKFQSYYKDLSQKVKDREIDLLMVVNMFLTGFDATRLNTLW
VDKNLKYHGLIQAFSRANRILDSVKTHGNIVCFRDLEQDLNDALMLFGNKDAKSIALLRK
YEDYLKGYTDNNKEYEGYEGLIERLLREFPLKEPIISESQKKDFIKLFGKILKLENILNS
FENFKKDNYIKARDFQDYQSKYLDFYDEMRPEKGRDKEEINDDLIFEIELIKQVEVNIDY
ILNLIEEFAKEHGVEIQGVKTKIEPIINSSIELRNKKDLIMDFIDKYNKDQEVHAHFQDY
IHQKREEEFQNIIEENRLNEEKAYLFMQHAFKGGEISFSGTEFPKIIEEKPSRFNKNSRY
QEVKEKVAASLSRFFHRFCDLTSSIFKKNEVKKDEINEK
NT seq 3000 nt   +upstreamnt  +downstreamnt
atgaattatgagattatcgcagaaaataatgaaagcaccgtgatggccgagtatcatagc
gataatgaaaaaaaaggcgcttatgagagcgaagcagagctagaaagggcgtttattgcg
cttttacaaaaacaaggctatgaatttaaaaaaatccacaaagaacaagaattaaaagac
aatttaaaagagcagttagaaaagcttaacgatcattatttcacgcctaaggaatgggac
actctttattctcaattcatcgctagtaaaaacgatgattataaggctaaaacgagaaaa
atccaagaagatccgatttttaacctaacccttgagaacgggaaaaccaaaaacattaaa
atcattgataagaaaaatatccataaaaacgctctgcaagtgatccaccaatacagcact
aaagggaagtatgagaaccgctatgatgtgagtatccttgtgaatggcttgcctttagtg
catgtggaattgaaaagaagaggcgtagcgattagagaggcgttcaatcaaatcaagcgc
tataaaagggatagttttagcgctgaagacgggctttttgatttcgtgcagatttttgtt
atcagtaacggcactagctctaaatactattcaaacaccacaagaatagcccagctggaa
aaaaaccataaagccgatacttttgaattcacgaattattgggcggatagcaaaaatcat
aatattgaagatttaatggattttgcccggtcgttttttgcaaagcgcagccttttgaat
gttttaacgcgctattgcgttttcacgagcgatgaggttttattggtgatgcggccttat
caaatcgtggcggccgaaaggattttagaaaaaatcaaaaccgcacaaaatagtaaaact
tatgggaaaaatcaaagcggaggctatatctggcacacgacagggagcggtaaaacctta
acgagctttaaaagtgcggtgttggctaaagaattagagagtatttcaaaagttttgttt
gtggtggatagaaaggatttagactatcaaaccatgaaagaatacgataaattccaaaaa
gattgcgccaattccaacacaagcaccaagattttaaaagaacagcttgaaaaccctaac
gctaaaatcattatcaccacgatccaaaaattagacaaattcgttaaatcccaccttaaa
gggcatgcgatttttaatgaagaagtggtgatgatttttgatgaatgccataggagtcag
ttaggatcaatgcatcaagccatcactaaagcgtttaaaaaataccacctttttggattc
acaggcacgcccatttttgcacaaaattgcgataaaaacaaccctttaggcacgacagag
cagaaatttgggaaatgcctccaccaatacactattattgatgcgatcagggataaaaat
gttttaccctttagagtggaataccacaacaccattaaagctaaagagggcattatagat
aacaaggttagagcggttgatgaaaaaaacgcccttttggataccagaaggatcaaagaa
atcactaaatgcattttagagcgtttcaatcaagccaccaaaaataaaaaattcaattcc
attctggcatgctctagtatagaagcgctgaaaaaatactacctggcttttaaagaagaa
aaacacgaccttaaaatcgctaccatttttagctatagcgccaatgaagattttgatgcg
ctagaagatgaaaacaatgaaagcgctaatgggctagataaaagctcaagggatttttta
gagggcgcgattgcggattataatggaatgtttaaaacttcttttgacacttcggatcaa
aaattccaaagctattataaggatctttctcaaaaagtaaaggatcgtgaaatcgatctt
ttaatggtggttaatatgtttttgaccgggtttgacgctacaaggctcaacaccctttgg
gtggataaaaacctcaaataccatgggctaattcaggctttttcgcgcgcaaaccgcatt
ttagatagcgttaaaacgcatgggaatatcgtgtgttttagggatttagagcaagattta
aatgacgctctcatgctttttggcaacaaggacgccaaatctattgcgctattaagaaag
tatgaagattatttgaaaggctacacggataataataaggaatacgagggctatgagggt
ttgattgaaaggcttttaagagaatttcccttaaaagagccgattatttcagaaagccag
aaaaaggatttcattaagctttttggcaagattttgaaattagaaaatattttaaacagc
tttgaaaattttaaaaaagataattacatcaaggcgagggattttcaagactatcaaagc
aaataccttgatttttacgatgaaatgaggccagaaaaagggagggataaagaagagatt
aacgacgatttgatttttgaaattgaactcattaagcaagtggaagtcaatattgactat
attttgaatttgattgaagagttcgctaaagagcatggggtggaaattcaaggcgttaaa
accaaaatagagccaatcatcaactccagcatagagctaaggaataaaaaagatttgatc
atggatttcattgacaaatacaacaaagaccaagaagtccatgcgcattttcaagattat
atccaccaaaaaagagaagaggaattccaaaatatcatagaagaaaaccgcttgaatgaa
gaaaaagcctatttattcatgcagcatgcctttaaagggggcgaaatcagcttcagcggg
acggaattccctaaaatcattgaagaaaaaccctccaggtttaacaaaaattcgcgctat
caagaggtgaaagaaaaagtcgctgcaagcctttctcgttttttccaccgcttttgtgat
ctcactagttctatatttaagaaaaatgaggttaaaaaagatgagattaatgaaaaatag

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