Helicobacter pylori Aklavik117: HPAKL117_04390
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Entry
HPAKL117_04390 CDS
T02352
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya00220
Arginine biosynthesis
hpya00240
Pyrimidine metabolism
hpya00250
Alanine, aspartate and glutamate metabolism
hpya01100
Metabolic pathways
hpya01110
Biosynthesis of secondary metabolites
hpya01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HPAKL117_04390 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HPAKL117_04390 (carB)
00220 Arginine biosynthesis
HPAKL117_04390 (carB)
Enzymes [BR:
hpya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HPAKL117_04390 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AFX91277
LinkDB
All DBs
Position
complement(915569..918826)
Genome browser
AA seq
1085 aa
AA seq
DB search
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEF
SHQTYIQPITPENIAAIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEA
IKKGEDRQAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVA
YNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDNKDNCIIVCCIENIDPMGV
HTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNP
RVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAF
EKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEMIKKEIR
RPNFKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDAKKLRG
LKNLGFSDARIAAKIKENENLEVSPFEVELARMHLQIAPNFEEVDTCAAEFLSLTPYLYS
TYAPNPLPPIENKQEKKEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNC
NPETVSTDYDTSDTLYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPI
IGTPFKVIDIAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLG
GQHMQILENIEELRHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGI
LQHIEEAGIHSGDSACFIPSTLSPEILDEIERVSAKIALHLGVVGLLNIQFAVHHNSLYL
IEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVGYSKGVYKPKMP
HFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARTLGLAFFKAQTACFNPIKNKGLI
FVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVESLKVLKISEGRPNIMDLM
MNGEISMAINTSDHKSQDDAKLIRTSVLKNHVSYFTTLSAIEVLILALEESSKEDELLAL
QDYLK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgatatttccaacatcctactgataggatcaggccctattgtgatc
gggcaagcttgcgagtttgactactcagggactcaaagttgtaaaaccttaaaatcttta
ggttatagagtgatcttaatcaattctaacccggccaccgtgatgactgaccctgaattt
tctcatcaaacttatatccaacccatcaccccagaaaatatcgctgctatcatcaaaaaa
gaaaagattgacgctattttacccacaatgggcgggcaaactgctttgaatgcggtcatg
caaatgcaccaaaagggcatgttagaaggtgtggagcttttaggggctaagattgaagcg
attaaaaaaggcgaagacaggcaggctttcaaagaagcgatgttaaaaatcgggatggat
ttgcctaaagggcgttacgcttatagcgagttagaagccctagaagccatcaatgaaatt
ggctttccagccattatcagagcgagtttcactctggctgggggagggagtggggtcgct
tacaatattgaagagtttcaagaattggctaaaaacgccctagacgcttcgcccattaat
gaaattttgattgaagagtccttattggggtggaaagaatatgaaatggaagtcatacga
gataataaggataattgcatcattgtgtgctgtattgaaaatattgaccccatgggcgtt
cataccggcgatagcatcaccatcgctccaagcctaaccttaaccgataaagaataccaa
cgcatgcgcgatgcgagctttgcgattttgagagaaattggcgtggatacgggcgggagt
aatgtgcagtttgctatccacccagagactttaagaatggttgtgattgagatgaaccca
cgagtgagccgcagctccgcattagcttcaaaagcgaccgggtttcccattgcaaaagtg
gctaccatgcttgcggtgggttttagcttagatgaaattcaaaacgatattaccaacacc
ccggcgagttttgagcctagtttggattatatcgtggtgaaaatccctcgctttgcgttt
gaaaaatttgccggtgtttctagcactttggggacttctatgaaaagcattggcgaagtg
atggcgataggggggaatttcttagaagccttacaaaaagcgttatgctctttggaaaac
aattggctagggtttgaatcgttaagcaaagatttagaaatgataaaaaaggaaatccgc
cggccgaatttcaagcgcttgctctatatcgctgatgcgttcaggcttggcgtttgtgtt
gatgaagtgtttgaattatgccagattgacaggtggtttttatctcaaatccaaaagcta
gtcaaagcagaagaaagcatcaattctagcgttttaacggacgctaaaaaattaagaggg
cttaaaaatttaggctttagcgatgccaggattgccgctaaaatcaaagaaaatgaaaat
ttagaggtgagtccttttgaagtggaattagccagaatgcatttgcaaatcgcgcctaat
tttgaagaggtggatacttgcgcggcggagtttttatcgctcacgccttatttgtattcc
acctatgcccctaaccctttaccccccattgaaaacaaacaagaaaagaaagaaaagaaa
atcctaatcataggctctgggcctaatcgcatcggtcaaggcattgagtttgattattgt
tgcgtgcatgcgagctttgctttgaaagatttaaacatcaaaagcgtcatgctcaattgc
aacccagaaactgtgagcacagattatgatacaagcgatacgctctattttgaacccatt
cattttgagtgcgtgaagagcatcattcaaagggagcgcgtggatggcattatcgtgcat
tttgggggacaaacccctttaaaactcgctaaagatctagcgaagatgcaagcccccatt
attggcacgccttttaaggtgattgatattgcagaagatagggaaaaattttccctcttt
ttaaaagagcttgacatcaagcagcctgaaaacggcatggctaagagcgttgatgaagcc
tatagtatcgccaatgtgattggtttccctattattgtgcgccccagttatgtgctaggc
ggccaacacatgcaaattttagaaaatattgaagaattgcgccattatttagaaagcgtt
acgcatgctttagagattagccctaaaaatccgctcctcattgataagtttttagaaaaa
gcggtggaattagatgtggatgccatttgcgataaaaaagaggtctatattgccggcatt
ttacagcacattgaagaagccggaatccattcaggcgattcggcgtgctttatcccttcc
actttaagccctgaaattttagatgaaattgagcgagtgagcgcgaaaatcgctctgcat
ttaggcgtggtagggctattgaatatccaatttgctgtgcatcacaattcgctctatttg
attgaagtcaatcccagagccagccgaaccgtgccttttttaagcaaggctttaggcgtt
cctttagccaaagttgcgactagggttatggtgttagaagatttgaaagaagccttgaag
ttctatgataaaaaaaatatcgtgggatattctaaaggcgtttataagcctaaaatgcct
cattttgtggctttaaaagaagcggttttcccttttaataagctttatggatcggatttg
attttggggcctgagatgaaaagcaccggcgaagtgatggggattgctagaactttagga
ctggcttttttcaaggctcaaacggcttgctttaaccccattaaaaacaaggggcttatt
tttgtttctattaaggataaggataaagaagaagcatgcgttttaatgaagcgcttggtt
cagttaggctttgaattgtgtgctacagaaggcacgcataaagctttggaaaaagccggt
gtggagtctttgaaagtgcttaaaatctccgaaggccgccccaatatcatggatttaatg
atgaatggggaaatcagcatggctatcaacaccagcgatcacaaatctcaagatgacgcc
aaactcattcgcacttcggtgcttaaaaaccatgtgagttatttcacgactttaagcgcg
atagaagttttgattttagcgttagaagaaagctctaaagaagacgagttgttagcctta
caagattatttgaagtag
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