Helicobacter pylori Aklavik117: HPAKL117_04925
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Entry
HPAKL117_04925 CDS
T02352
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPAKL117_04925 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hpya03011
]
HPAKL117_04925 (rpsA)
Ribosome [BR:
hpya03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPAKL117_04925 (rpsA)
Bacteria
HPAKL117_04925 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
CsrA
CBFD_NFYB_HMF
RuBisCo_chap_C
GspL_C
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
AFX91380
LinkDB
All DBs
Position
1041365..1043023
Genome browser
AA seq
552 aa
AA seq
DB search
MSKIPDDQNFNDEEENFAELLKKEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLN
LSEITDEKGQLLYQKNDPIIVHVSEKGEHPSVSYKKAISQQKIQAKIEELGENYENTIIE
GKIVGKNKGGYIVESQGVEYFLSRSRSSLKNDANHINKRIKACIIRVDKENHSINISRKR
FFEVNDKRQLEVSKELLEATEPVLGVVRQITPFGIFVEVKGVEGLVYYSEISHKGPVNPE
KYYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIENYGA
FVDIGNDIEGFLHVSEISWDKNVSHPSNYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNR
PFDVFESKHQVGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDV
IKVKILKINKKDRKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFINADGID
VLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSDD
KMTLGDILKEKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagataccagatgatcagaactttaatgacgaggaggaaaacttcgcagaactc
ttaaaaaaagaagaaaccctagaaaaaggcactatcaaagaagggctaatcgtttccatc
aatgagaatgatggttatgctatggtgagcgtgggcggtaagacagaaggccgtttgaat
ttgagcgaaattaccgatgaaaaggggcagttgctgtatcaaaaaaatgaccccattatc
gtgcatgtgtccgaaaaaggtgaacaccctagcgtttcctacaaaaaggccatttctcaa
caaaagattcaagccaaaattgaagaattaggcgaaaactatgaaaacaccatcattgaa
ggcaagattgtaggcaagaataaagggggctatatcgtggagtctcagggcgtggagtat
ttcctctcccgctcgcgctcttctttaaagaatgacgcaaaccatatcaacaaacgcatt
aaagcgtgcatcattcgtgtggataaggaaaaccattctatcaatatttctcgcaaacga
ttctttgaagtcaatgacaaacgacagcttgaagtttctaaagaattgttagaagcgaca
gagccggtgttaggggttgtgcgccagatcaccccttttggtatttttgtagaagttaag
ggggttgaaggcttagtctattattctgaaatcagccataaaggaccggtaaaccctgaa
aaatactacaaagagggcgatgaagtctatgtcaaagccatcgcttatgatgaagaaaaa
agacgcctttcactctccataaaagcgaccatagaagacccatgggaagagatccaagac
aagctaaaacccggatacgccattaaggtggtggtgagcaatattgaaaattatggggcg
tttgtggatattggtaatgatattgaaggctttttgcatgtttctgaaatctcttgggat
aaaaatgtcagccaccctagcaactacttgagcgtggggcaagagattgatgtgaagatc
attgacattgatccaaaaaaccgccgcttaagggtttctttaaaacaactcactaacagg
ccttttgatgtttttgaatccaaacaccaagtgggggatgttttagaaggcaaagtggcg
actttaacggattttggggcgtttttgaatctgggtggggtggatggtttgctccacaat
cacgacgctttttgggataaagataaaaaatgcaaagaccactataaaattggcgatgtg
atcaaagtgaaaatccttaaaatcaacaaaaaagatagaaagatctctttgagcgcgaag
cacttggttacttcccctacagaagaattcgctcaaaagcataaaacagatagcgtgatt
caaggtaaagtggtgagtattaaggattttggcgtcttcattaacgctgatggcattgat
gtgctgattaaaaatgaagatttgaaccccttgaaaaaagatgaaatcaaaatagggcaa
gaaatcacatgcgtggtggttgcgattgaaaaatctaacaacaaggtgcgcgcttctgtg
cataggttagagcgcaaaaaagaaaaagaagaattgcaagcttttaacacgagcgatgat
aaaatgactttaggggatattcttaaagaaaaactctaa
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