Helicobacter pylori Aklavik117: HPAKL117_04985
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Entry
HPAKL117_04985 CDS
T02352
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPAKL117_04985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_04985
Enzymes [BR:
hpya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPAKL117_04985
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPAKL117_04985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_19
PriA_3primeBD
AAA_22
ADDB_N
nSTAND3
PhoH
AAA_7
AAA_30
UvrD-helicase
SLFN-g3_helicase
RecA
Glycos_transf_2
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AFX91392
LinkDB
All DBs
Position
complement(1054854..1056713)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKERHQKGALVNIHLRNKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIELALFIAQYYSANLSSVLNLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHAIAQTLEQKKSALLLVPEIALTPQMQQRLKKVFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAAVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSLCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagagcggcaccaaaaaggagcgttagtcaatatccatttaaggaataaaacgcttttg
ggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaactggaaaaaacc
ccttattttttactcccctttcaaatagagctcgctctatttatcgctcaatattactcg
gctaatctttcttcagtcttaaatctttttaccccttttaaagaatgcgatttagtgggg
ttagaaaaaattgagcctgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcttgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcatgcaatcgctcaaactttagagcaaaaaaaaagcgcattattgttagtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaaaggtctttaaagaaaat
ttgggcctgtggcatagcaaactctctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttacctcttaag
gaattgggtttaatcattgtagatgaagagcatgacttttcttataaatctcatcaaagc
cctatgtataacgctagggatttgtgcttgtatttgtcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctacacgcctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagcgctaaaacaagttatagacaaaaacgaacaa
gctattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgctat
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagcgcgtgtcaa
agcgaagttttagtgggtaaaaggataggcaccatgcaagtgttaaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctgcacaatattttaaacgatttcaacgctcaaaaaaccaacatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggctgttttaggcatagac
aatatcattaaatccaatagttacagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctgttagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgctagagtttaagcataaaaat
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttctttgtgtttagaa
aagggcgtaacgctctctagttttaaagcccccattgaaaaaatcgcttcttcttaccgc
taccttattttattgcgttctaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccctaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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