Helicobacter pylori Aklavik117: HPAKL117_05110
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Entry
HPAKL117_05110 CDS
T02352
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpya
Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpya03016
]
HPAKL117_05110 (truA)
Enzymes [BR:
hpya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPAKL117_05110 (truA)
Transfer RNA biogenesis [BR:
hpya03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPAKL117_05110 (truA)
Prokaryotic type
HPAKL117_05110 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFX91417
LinkDB
All DBs
Position
1080777..1081505
Genome browser
AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHANNQV
LSFYAPKHWNAAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGAMTNPKRAIFNAFAYKTFIIGHEC
VVFKIIGDAFLRSSVRLIVQACVQYSLEKITLAEIQAQIHNIKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggccactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagcgctttaaatgcgctagggatt
aaaagcgttgtggttgcggccgggcgcacggataaaggcgtgcatgccaacaaccaggtt
ttgtctttttacgccccaaaacactggaatgccgctaaattattttattatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttaacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggatcactggatgcattaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggcgatgaccaat
cctaaacgtgctatttttaacgcttttgcttataaaacctttatcatagggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctctagcgtgcgtttgattgttcaa
gcgtgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacatcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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