Helicobacter pylori Aklavik117: HPAKL117_05515
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Entry
HPAKL117_05515 CDS
T02352
Name
(GenBank) outer membrane protein HofH
Organism
hpya
Helicobacter pylori Aklavik117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
AFX91490
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Position
1158695..1160110
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AA seq
471 aa
AA seq
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MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNIL
QTDSLETQNMKHNKNVRNYVFSDAYLEYRYKDYFEFKGGRYLSGMPFKSGQTQGFQVSGQ
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGYKVLYGTHAVQL
TYKPHRFLVEAFYYLSPQIFNAPGIKIGWDSNPNFSGTGFRSDTSITGFFPIYYPWMIVK
SNGSPVYRYDTPATQNGQNLMIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMS
GNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLGYKF
NEYLSGSVDLAYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALIASF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcaagtcaggttttattctttggggcatttttaagctcttcgttacaaggt
tttgaagccaagctcaacggctttgtggatcaatccagcactatcggttttaaccagcat
aaaatcaataaagaaagaggcatctaccctatgcagcaattcgcaacgattgcgggctat
ttagggcttggttttagcctgttacccaaaaaggtttcagaccatgttctaaaaggcaaa
atagggggcatggtgggatctattttctatgacggcacgaagaagtttgaagacggatct
gtagcttacaacctctttggttattatgatgggttcatggggggttatacaaacatctta
caaaccgatagccttgaaacacagaacatgaaacacaataaaaatgtccgcaattatgtc
tttagcgatgcgtatttggaataccgctataaagattattttgaattcaagggcgggcgc
tacctctctggcatgccttttaaaagcgggcaaactcaaggctttcaagtttctgggcaa
tacaagcatgcgcgcttgacttggtttagctcttttgggagagcgttcgcttatggttcg
tttttgatggattggtttgccgctaggaccacttatagcgggggcttcaccaaaaacgat
aagggaggttatgatagccatggatacaaggtgctttatggcacgcatgcggtgcaactc
acctataaacctcatcgtttcctcgtggaggccttctattacctctcgcctcaaatcttt
aacgctccgggcattaagattggttgggactctaaccctaattttagcggcacaggcttt
cgctcagatacgagcatcacagggtttttccccatttactacccctggatgatcgttaaa
tccaatgggagtccggtctatagatacgacacgccagccactcaaaacgggcaaaatctc
atgatccgccaacgctttgatattaacaattacaatgtttccatcgctttttataaagtc
tttcaaaacgctaatggttggataggcaatatgggtaatccaagcggtgtgataatgtca
ggtaacagcgtgtatgctggttttacaggcacagcccttaaaagagacgccgctaccatt
ttcctttcttgtggtggcacccattttgccaaaaaattcacatggaaattcgccacgcaa
tactccaattcagtagtctcttgggaagcgagagcgatgatctctttaggctataaattc
aatgaatacttgagcggtagcgtggatcttgcgtattatggcgtgcatactaacaaaggc
tttaaaccgggtgaaaacgggcctgtgcctaaaaacttccccgccctttattctgacagg
agcgcgttatacacggccctaatagcgtcattttga
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