Helicobacter pylori Aklavik117: HPAKL117_05915
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Entry
HPAKL117_05915 CDS
T02352
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03030
DNA replication
hpya03430
Mismatch repair
hpya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPAKL117_05915
03430 Mismatch repair
HPAKL117_05915
03440 Homologous recombination
HPAKL117_05915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpya03032
]
HPAKL117_05915
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_05915
Enzymes [BR:
hpya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPAKL117_05915
DNA replication proteins [BR:
hpya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPAKL117_05915
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPAKL117_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
Motif
Other DBs
NCBI-ProteinID:
AFX91568
LinkDB
All DBs
Position
complement(1245345..1246367)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDNYLKQRLPKAVFLYGEFDFFIHYYIQTISSLFKCDNPDTETSFFYASDYEKSQ
ITTLLEQDSLFGGSSLVVLKLDFALHKKFKENDINLFLKALERPSHNRLIIGLYNSKSDT
TKYKYTSEIIVKLFQKSPLKDEAIHARFFIPKAWESLKFLQERANFLHLDISNHLLNALF
ETNNEDLSVSFNDLDKLAILNAPITLEDIQELSSNAGDMDLQKLILGLFLKKSVLDIYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLMDAKEVLGYAPPKEIAENYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTPIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggacaattatttaaaacaacgactccctaaagcggtgtttttg
tatggggagtttgatttttttatccattattacattcaaacgattagctcgctttttaaa
tgcgataaccctgacacagaaacttcgtttttttatgcgagcgattatgaaaaaagccag
attacgacccttttagagcaggattctttatttggagggagcagtttagtcgttttaaaa
ttagattttgccctgcataagaaatttaaggaaaatgacatcaatctttttttaaaagct
ttagagcggcctagccataacaggcttatcatagggctttataattctaaaagcgacacc
acaaaatataaatacactagcgaaattatcgttaaacttttccaaaaaagccccttgaaa
gatgaagcaatccatgcgcgcttttttatccctaaagcgtgggagagtttgaaattcttg
caagaaagggctaattttttgcatttagacatcagcaatcatcttttaaacgctcttttt
gaaaccaataacgaagacttaagcgtttcgtttaacgatttagacaaactagcgatacta
aatgcgcccatcactttagaagacattcaagaattaagctctaatgcgggggatatggat
ttgcaaaagctcattttagggctttttttgaaaaaaagcgtgcttgatatttatgattat
ttgttaaaagagggcaaaaaagatgcggatattttaagggggttagagcgctatttttac
cagctttttttatttttcgctcatattaaaacgaccggtttaatggatgctaaagaggtt
ttaggctacgctccccctaaagagattgcagaaaattacgctaaaaacgccctgcgtttg
aaagaagccggctataagagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggaattgggttttttgtatttgacccccattcaaaaaatcatcaaccct
tga
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