Helicobacter pylori Aklavik117: HPAKL117_06950
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Entry
HPAKL117_06950 CDS
T02352
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpya
Helicobacter pylori Aklavik117
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpya03016
]
HPAKL117_06950 (trmE)
Transfer RNA biogenesis [BR:
hpya03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPAKL117_06950 (trmE)
Prokaryotic type
Methyltransferases
HPAKL117_06950 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
Ras
cobW
Arf
iSTAND
ATP_bind_1
AAA_29
MMR_HSR1_Xtn
ATP-synt_ab_N
Roc
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AFX91773
LinkDB
All DBs
Position
1429953..1431305
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPSGKGAISIIKISGNNALNILKQLTQKQDFTPRYAYVHDIFSNGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQTCLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPS
DFLNEVSLNLEKQIASFKDLLDFSNMQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESTDKIERLGIEKSLKSLENCDIILGVF
DLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELEILKSYLKIPYSLLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHLETLELFSYHLL
SAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctaccccttcaggcaagggagcgattagtattatt
aaaatcagcggcaataacgctctaaatattctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcacgatattttttctaatggtgttttattggacaaagcg
ttagtgatttatttcaaagccccttatagtttcaccggcgaagatgtgtgcgaaatccaa
tgccatggaaacccccttttggcgcaaaatatcttacaaacttgcttgaatttaggcgct
aggcttgctaaagcgggggaatttagtaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccaggcaacttaaaggcgagttaaaaatttttattgaagaagctagaaataatctt
ttaaagcttttagctagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttaaatgaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagactta
ctagatttttctaacatgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagctctttattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattgcaaggg
cataaggtgcgtttgattgatacggctggcattagagagagcacggataaaatagagcga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacattattttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaacctgattgacaccctcaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcgcccaagctggagcttgaa
attttaaaatcttatcttaaaatcccttattctttactagaaaccaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagcgcctttttccccaaactagacact
caaaacaagctcttactcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaaaaccatttagaaactttagagcttttttcttatcatctttta
agcgcgatagaaaacttgaacttgctcacccgcccttatgaaaccagccaaatgctagac
agcatgtttagcgaattttgcttaggcaaatga
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