Helicobacter pylori oki102: HPOKI102_01420
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Entry
HPOKI102_01420 CDS
T03182
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hpyb
Helicobacter pylori oki102
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyb03400
]
HPOKI102_01420
DNA repair and recombination proteins [BR:
hpyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPOKI102_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
AAA_24
NTPase_1
RecA
AAA_14
AAA_16
AAA_31
SLFN-g3_helicase
ATPase_2
NACHT
ABC_tran
AAA_22
AAA_5
CbiA
nSTAND3
DAP3
zf-C2H2_7th_ZNF462
DUF7129
ArsA_ATPase
NPHP3_N
Zeta_toxin
GvpD_P-loop
AAA_30
MeaB
AAA
SRP54
RsgA_GTPase
ResIII
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHN34288
LinkDB
All DBs
Position
272408..273754
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AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCIQCNAWESFIELNQAQKEVLNTLKNPIPKVQKSVSI
AAIEHEEVVKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRAIRLDCIEKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRDIAIFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSQEEPMEGSAITITLEG
SRALILEIQALVSECSFGSPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANAVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgagtgtcagcattgcggttttacaagccctaagtgg
ctgggcaagtgcattcaatgcaacgcatgggagagttttatagaattgaaccaagcccaa
aaggaagttttaaacacgcttaaaaatccgatcccaaaagtgcaaaaaagcgtttctatc
gctgcaattgagcatgaagaagtggtgaagttttcttctactcaaagcgaattggatatt
gttttgggtggggggattgctaaaggggggttgtatttagtgggggggagtcctggggta
ggcaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccattagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggctaat
atagaaagcgaaaattattttgcttgcgtgattgattccatccaaacgctttattcgcca
gagatttcttcagcgcccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttggccaaaacaagagatattgctatttttatcatcggtcatatcactaaagaaggg
agcatcgcagggcctagagtgctagagcatatggtggatagcgtgctgtattttgagggc
gatcccagcagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgagatgaaagagcagggtttggtgagcgccaaagaagcttcaagc
ttatttttttctcaagaagagcctatggaggggagtgccattaccatcactttagaaggc
tcaagagcgttgattttagaaatccaggcgttggtgagcgagtgcagtttcggatcaccc
aaacgattagcgaacgggtttgacaccaaccgccttaacatgcttatcgctttgttagaa
aaaaagctagaaatccccttaaaccgccatgatgtgtttattaatgtgagtgggggcatt
aagattagcgagccggcttgcgatttagcggtcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggcgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgctagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcctaaaaaacccagtcaaaaaacctctatcaaatgctatgaagccaatgcg
gtaggcaagattgttgaatggatgtga
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