Helicobacter pylori oki102: HPOKI102_02090
Help
Entry
HPOKI102_02090 CDS
T03182
Name
(GenBank) exonuclease
Organism
hpyb
Helicobacter pylori oki102
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Dna2
Motif
Other DBs
NCBI-ProteinID:
AHN34408
LinkDB
All DBs
Position
complement(410134..412470)
Genome browser
AA seq
778 aa
AA seq
DB search
MNLEKLFLEKTPLFVFSSTRRLKHFYLEQGEGFLPSAMSMGNFFEQAFYIPNKKKIPNSA
RQILMIDTIKAIAKEKKSILEGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSFK
DIYLDYEKHLEVLEMIYNRYIKKLEKLGFYDKIMQKKPTILKEFFEHFSSIEWHLDGFMS
VFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTFNDQ
KIEPKLYANSSYLKQGALVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDQNNNLNF
AMGLGAKNSPYYTELVKILEDLQTSDFNLSGSALLDLENITLPLLEQQSSKEKAPLKEAH
SQIMHQYYLLKDALKNYSLKDLLHLYLQEFEANFRLDDSSGGKIRVMDTLETRGMQFDKI
VIVDFNETCVPSLKDCDLFLNSALRKSLNLPTLFDKKNLQKHYYYQLFKNSKEIALSYIE
SETSKVSNMLLELNLHIEPIKDAYTLFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLT
CKRRFYYHYMKRFKESPKDESNSAVGSLLHELLKEAYEKDKNPYALEERLIWLLETRENI
TPKERLDTLVALKKIQAFYLKEKERFNAKIKILDLEKSFETTIQGVIFKGRIDRIDKTAD
NEIILLDYKFKNDLKLDNMSKTQRGGLSPIEIAQISTDYQMAIYAFAIKNLGYKDPIKAF
FYDLRKGELLEEDELILQAKMDHFEFSLIPKLKQEIDFEKTSEAKDCEYCSFKDMCNR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaaaaactttttttagaaaaaacccccctatttgtttttagctccaccagg
cgtttaaaacatttctatttagagcaaggcgaagggtttttgcctagcgcaatgagcatg
gggaatttttttgaacaggctttttacatccccaataaaaagaaaatccctaacagcgcg
cgccaaatcttaatgatagacaccattaaagccatcgctaaagaaaaaaaatccattctt
gaagggcttttgctttttgaaaacagctttttagggtatttggaaagcacttcttttttg
tttgatttgtttgatgagttaagttctgcttgtatcaagctcaatgaactttcttttaaa
gacatttacttggattatgaaaagcatttagaagtcttagaaatgatttataatcgttac
attaaaaagctagaaaaattaggcttttatgacaaaatcatgcaaaaaaagcccacgatt
ttaaaagaattttttgagcatttttcctccattgaatggcatctagacggctttatgagc
gtttttgaaaggcaatgcttattagaagtggccgaattagtgcctatcactttacaccta
tcttgcgataaatacaatcaaaaatttttggaatttttgaatctcaaattagaaacagat
tgcgattattccattgattttaaaacccaaaagatcctttctcaaacttttaatgatcaa
aaaatagaaccaaagctttatgctaactccagttatttaaaacaaggcgctttagtttta
caaaccatagaagagtatttgcaaaaagataacgatcctaataaaatggcgatcatcacg
cccaatgcggattttttgccttttttaaaactcttagaccaaaacaacaatttgaatttt
gcgatgggattaggggctaaaaacagcccttattatacagagcttgtaaaaatcttagaa
gatttacaaacaagcgattttaatttaagcgggtctgcgttattggatttagaaaatatt
acgctcccgcttttagaacaacaaagctctaaagaaaaagcgcccttaaaagaagcgcat
tctcaaatcatgcaccagtattatcttctaaaagacgcgcttaaaaactacagccttaaa
gatttattgcatttgtatttgcaagaatttgaagccaacttccgcttagacgattctagt
gggggcaaaatacgagtcatggacactttagagacaaggggcatgcaatttgataaaatc
gttattgtagattttaatgaaacttgcgtgccaagccttaaagactgcgatttgttttta
aactctgctttaagaaaatcgctcaacctccccactttattcgataagaaaaatttgcaa
aaacactattactaccagctctttaaaaactctaaagaaatagcgctttcttatatagag
agcgaaacttcaaaagtctctaatatgcttttggaattaaatttgcatatagagcctatc
aaagacgcttacacgctttttgcaccaagtcctttaaaagactaccaagaagaagaaatc
aaagccgctatccctaaagattttagctttagcgctagctcattaaacgcttttttaact
tgcaagcgccgtttttactaccactacatgaagcgattcaaagaaagccctaaagacgaa
agtaatagcgctgtgggcagtttgctccatgaacttttaaaagaagcttatgaaaaagac
aaaaacccttatgcgttagaagagaggctcatttggctcttggaaacaagagaaaacatt
acccctaaagagcgtttagacactcttgtagcgctcaaaaaaatccaggctttttatctt
aaagaaaaagaacgctttaatgcaaaaatcaaaatccttgatcttgaaaaaagctttgaa
acaaccattcaaggcgttatttttaaagggcgtatagacaggattgacaaaacggctgac
aatgagattattttattggattacaaattcaaaaacgatttgaaattagacaacatgagt
aaaacacaaagaggaggcttaagccccatagaaatcgctcaaatcagcaccgattatcaa
atggctatctatgcgtttgccattaaaaatctgggctacaaagatcctataaaagccttt
ttttatgatttgagaaagggcgaattactagaagaagatgagcttattttacaggctaaa
atggatcattttgaattttctcttatccccaaactcaagcaagaaattgattttgaaaaa
acttcagaggctaaagattgtgaatattgctcttttaaagacatgtgcaaccgatga
DBGET
integrated database retrieval system
