Helicobacter pylori oki102: HPOKI102_03560
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Entry
HPOKI102_03560 CDS
T03182
Name
(GenBank) membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hpyb
Helicobacter pylori oki102
Pathway
hpyb00540
Lipopolysaccharide biosynthesis
hpyb01100
Metabolic pathways
Module
hpyb_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPOKI102_03560
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpyb01005
]
HPOKI102_03560
Lipopolysaccharide biosynthesis proteins [BR:
hpyb01005
]
Lipid A
HPOKI102_03560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AHN34681
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Position
complement(703871..704872)
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AA seq
333 aa
AA seq
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MFFKFILCLLLGVFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLENRKLVHLHDNHPYGGY
LRVNLNVYNRHKTFMELFTLSLGTTGQDSLAAQTQHLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNT
AFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAIMWR
SFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaatttattttatgtttattattaggagtgtttgcatgggcaaaagaggat
attcttaccccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaacccttacattgatgagtattataccgcaggcaaccaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttagggttt
ttcaataaaagccctagggttactcgttttggcatttctctcgcccaagacatgtatacc
ccttcacttgaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaacgtgtataaccgccataaaactttcatggagttattcacgctt
tctttaggcacaacagggcaagattctttggccgctcaaacgcagcatctcattcataaa
tggggccatgacccccaattttatggctggaacacgcaactcaaaaacgaatttatcttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgctttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccagctcggc
tcgctctttagggctgggtataacttggacgctgattatggggtcaataaggtcaatacc
gcttttgatgggggcatgccttatagcgataaattttccatctatttttttgcaggggct
tttgggcgcttccaaccccttaacattttcattcaaggcaatagccctgaaactaggggc
attgctaatttggaatactttgtttatgccagtgaaataggagcggctataatgtggcgc
agctttagggtggcttttacgattaccgatattagtaaaacctttcaatcccagcctaaa
caccaccaaatcggcactttagaattgaattttgccttttga
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