Helicobacter pylori oki102: HPOKI102_05730
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Entry
HPOKI102_05730 CDS
T03182
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpyb
Helicobacter pylori oki102
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyb03016
]
HPOKI102_05730
Enzymes [BR:
hpyb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPOKI102_05730
Transfer RNA biogenesis [BR:
hpyb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI102_05730
Prokaryotic type
HPOKI102_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF5534
Motif
Other DBs
NCBI-ProteinID:
AHN35046
LinkDB
All DBs
Position
1166752..1167480
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AA seq
242 aa
AA seq
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MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNVLGIKSVVVAAGRTDKGVHANNQV
LSFYAPKHWNAAKLFYHLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRTIFNAFAYKTFIIGHEC
VVFKVIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNIKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagtgctttaaatgtgctagggatt
aaaagcgttgtggttgcagctgggcgcacggataagggcgtgcatgcgaacaatcaagtg
ctgtctttttacgctccaaaacactggaacgccgctaaattattttatcatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacaaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggatcactggatgcgctaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggcgacaaccaat
cctaaacgcaccatttttaacgcttttgcttataaaacctttatcatagggcatgagtgc
gtggtgtttaaagtcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacatcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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