Helicobacter pylori oki112: HPOKI112_02370
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Entry
HPOKI112_02370 CDS
T03723
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpyc
Helicobacter pylori oki112
Pathway
hpyc02020
Two-component system
hpyc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPOKI112_02370
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPOKI112_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpyc03021
]
HPOKI112_02370
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpyc02035
]
HPOKI112_02370
Transcription machinery [BR:
hpyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPOKI112_02370
Bacterial motility proteins [BR:
hpyc02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPOKI112_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Microp_apicomplexa_17
MarR
MarR_2
KORA
TetR_C_44
HTH_34
HTH_10
DUF4202
DUF7440
Motif
Other DBs
NCBI-ProteinID:
AHN35936
LinkDB
All DBs
Position
467500..468276
Genome browser
AA seq
258 aa
AA seq
DB search
MILMMENRMPKEIQKTQTSETSEKNIEKVLNAYDKQQHHYQDALAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDIEITKHLNEHGKEPSDAYLAQTLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactcaaacaagcgaa
acaagcgaaaaaaatatagaaaaggttttgaacgcctatgataagcagcaacaccactat
caagacgcgctcgctatccagtatttaccggccgtgcgcgctatggcgtttcgtttgaaa
gaacgcttgcccagctctattgattttaacgatctggtttctattggcactgaagaattg
attaaattagccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggggcgatgctagattatttgcgctctttagatgtgatttctcgctcc
aacagaaagctgattaaaagcattgatattgaaatcaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttagcgcaaactttaggcgaaaatattgaaaaaattaaa
gaagccaaaacggcttcagatatttatgcgttagtgccaatagacgaacaattcaatgcg
attgagcaagatgaaatcactaaaaaaattgaagcagaagaattgttagagcatgtccaa
aaagcgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatctgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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integrated database retrieval system
