Helicobacter pylori oki112: HPOKI112_03150
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Entry
HPOKI112_03150 CDS
T03723
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hpyc
Helicobacter pylori oki112
Pathway
hpyc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPOKI112_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpyc03021
]
HPOKI112_03150
03400 DNA repair and recombination proteins [BR:
hpyc03400
]
HPOKI112_03150
Enzymes [BR:
hpyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPOKI112_03150
Transcription machinery [BR:
hpyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPOKI112_03150
DNA repair and recombination proteins [BR:
hpyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPOKI112_03150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF2533
Motif
Other DBs
NCBI-ProteinID:
AHN36082
LinkDB
All DBs
Position
621701..621955
Genome browser
AA seq
84 aa
AA seq
DB search
MDRVQNKRINLKKERTESLVAQALKNIGNDRYMLDNLVFARVKQLNAGAKTLVNMDPKRH
KLVDIAIREIAEGKIDIDRIDERN
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
ttggatagagttcaaaataaaaggatcaatttgaaaaaagagagaacagagagtttagtc
gctcaagccttaaaaaatattgggaacgaccgctacatgctagataatttagttttcgct
cgtgtgaagcaattaaacgccggagccaaaactttagtgaatatggaccctaagcgtcat
aaattagtggatattgccattagagaaatcgctgaagggaaaattgatatagacaggata
gatgaacgaaattga
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integrated database retrieval system
