Helicobacter pylori oki112: HPOKI112_03465
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Entry
HPOKI112_03465 CDS
T03723
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpyc
Helicobacter pylori oki112
Pathway
hpyc03030
DNA replication
hpyc03430
Mismatch repair
hpyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI112_03465
03430 Mismatch repair
HPOKI112_03465
03440 Homologous recombination
HPOKI112_03465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyc03032
]
HPOKI112_03465
03400 DNA repair and recombination proteins [BR:
hpyc03400
]
HPOKI112_03465
Enzymes [BR:
hpyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI112_03465
DNA replication proteins [BR:
hpyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI112_03465
DNA repair and recombination proteins [BR:
hpyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI112_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
Atrophin-1
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_30
EH_Signature
DEAD
AAA_19
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
AHN36136
LinkDB
All DBs
Position
679894..681630
Genome browser
AA seq
578 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEVRLQERYAILENYETESVLEEMMLFLKAKLLSPDAYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQESKSADKIEKPEKRESAETPPMLSAKDRIFHNLFKQVQTLVYERNYELGAVFE
KNIRFIDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKNQNKS
ALEEIKEFKFPYSKPKPTTETTAEMKEKETKEKEIQEKEIKEKEIKEKEIKEKEIKEKEI
KEIQPKEAPTALQEFMANHSNLIEEIKSEFEIKSVELL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcacccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggacggagcgtctaatagggggattgat
gatgtccgtaatctcattgagcaaacgcgttacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcactcttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacagacgccttgaaattg
cccgctaccatactcagccgcacccagcatttccggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaattggctcacagcgggcaagggagcttgagggatacgatcactcttttagaa
caagccatcaattattgcgataacgctatcacagaaagcaaagtagctgaaatgttagga
gcgattgacaggagcgttttagaggatttttttcaaagcctaatcaaccaagatgaagtg
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgatgcttattccatccttttaata
gagcgcttttttaaaatcattatgagcggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttaaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcttttaaacaagaatccaaaagcgcagataaaatagaaaagccagaaaaa
agagaaagtgcagaaaccccccccatgctttcagccaaagatcgcatttttcacaacctt
ttcaaacaagttcaaacattggtttatgagcgcaactacgaattaggggcggtgtttgaa
aaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggagtcttta
gccacccataaagataaagagcttttaagagaacgatttaaaatcgtgaaaagtatcgtt
gatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaaaatcaaaataaaagc
gctttagaagaaattaaagagtttaaattcccttattcaaagcctaaaccaaccaccgaa
acgacggctgaaatgaaagaaaaagaaactaaagaaaaagagattcaagaaaaagaaatt
aaagaaaaagagattaaagaaaaagagattaaagaaaaagagattaaagaaaaagagatt
aaagaaatccaacccaaagaagcccctacagccttgcaagaattcatggctaaccattct
aatctcattgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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