Helicobacter pylori oki112: HPOKI112_03535
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Entry
HPOKI112_03535 CDS
T03723
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpyc
Helicobacter pylori oki112
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyc03032
]
HPOKI112_03535
03400 DNA repair and recombination proteins [BR:
hpyc03400
]
HPOKI112_03535
Enzymes [BR:
hpyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPOKI112_03535
DNA replication proteins [BR:
hpyc03032
]
Prokaryotic type
DNA Topoisomerases
HPOKI112_03535
DNA repair and recombination proteins [BR:
hpyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOKI112_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHN36148
LinkDB
All DBs
Position
complement(697007..699502)
Genome browser
AA seq
831 aa
AA seq
DB search
MQDNSVQDNSVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYA
MHELGLTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGS
IDGDNAAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGA
NGIAVGMATSIPPHRIDEIIDALAHVLENPNAELDEILEFVKGPDFPTGGIIYGKAGIIE
AYKTGRGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVR
DESDREGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRL
FLNHRKTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSQSPETAKNALMER
FTLSEIQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEERLNGVVKTELL
EVKEQFSSPRRTEIQESYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYEKQNRGGKGK
LSGSTYEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAP
DEKIMATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSCGVRAIVLDEGDELVSAKV
VDKNAKHLLIASHLGIFIKFPLEDVREMGRNARGVIGIRLNENDFVVGAVVISDDGNKLL
SVSENGLGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVGVISVDDENLDLMILTASAKM
IRVSIKDIRETGRNASGVKLINTADKVMYVNSCPKEEEPENLENPPAQLFE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataattcagtccaagataattcagtcaatgaaacaaaaaatattgtagaagtg
gggattgattcttctattgaagagagctatttagcctattccatgagcgtgatcataggg
cgtgctttaccggacgctagagatggcttaaagcctgtgcataggcgtattttgtatgcg
atgcatgaattaggccttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggt
gatgtgatcggtaaataccacccccatggcgataacgcggtttatgatgcgctagtgaga
atggcgcaagatttttctatgcgtttggaattagtggatgggcagggcaactttggctct
attgatggcgataacgctgcagcgatgcgttacactgaagccagaatgactaaggcgagt
gaagaaattttaagggatattgataaagacaccattgattttgtgcctaattacgatgac
accttaaaagaaccagatattttaccaagccgtctgcctaaccttttagtcaatggggct
aatgggatcgctgtagggatggcgacttctatcccccctcacagaattgatgaaatcata
gacgctttagcgcatgtcttagaaaaccctaacgctgaattagatgaaattttggaattt
gtcaaagggcctgactttcccactggtgggatcatttatggcaaggcgggcattattgaa
gcctataaaacggggcgagggcgcgtgaaagtgcgggccaaagtgcatgtggaaaagacg
aaaaataaagaaatcatcgttttagatgaaatgccttttcaaaccaataaagccaaatta
gtggaacaaatcagcgatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgc
gatgaaagcgatagagagggcattagagtggtgattgaattaaaaagagatgcgatgagt
gaaattgtcttaaaccacctttacaaactcaccaccatggagaccacttttagcatcatt
ttactcgctatttacaataaagagcctaagattttcacgcttttagagttgttgcgcctt
ttcttaaaccacagaaaaaccattattataagacgcacgatttttgaattggaaaaggct
aaggctagagcgcatattttagagggctatttgatcgcattagacaatattgatgaaatc
gtgcagctcattaaaacaagccaaagcccagaaacggctaaaaacgccttaatggagcgt
ttcactttgagcgaaatccaaagcaaagccattttagaaatgcgtttgcaacgcttaaca
ggccttgaaagagataaaatcaaagaagaataccaaaacttgttagagcttattgatgat
ctcaatggcattttaaagagcgaagaacgcttgaatggagtcgtcaaaacagagctttta
gaagtcaaagagcaattttcttctccaaggcgcactgaaattcaagaatcttatgaaaat
attgacatagaagatttgatcgctaatgagcctatggtggtgagcatgagctataaaggc
tatgtgaaaagagtggatttaaaagcttatgaaaagcaaaatcgtggcggtaagggcaag
ctttcaggcagcacttatgaagacgacttcattgaaaacttttttgtggctaacacgcat
gatattttgctctttatcaccaataaggggcaattgtatcatctaaaagtctataaaatc
ccagaagcgagccggatcgctatgggtaaagctattgtgaatttaatctcgctcgctcct
gatgaaaagatcatggcaaccttaagcaccaaagactttagcgatgaacgctctttagcc
ttcttcacgaaaaatggtgtggtgaagcgcaccaatttgagcgaatttgggagcaacagg
agttgtggtgtcagagcgattgttttagatgaaggcgatgaattagtgagtgcaaaagtt
gtggataaaaacgctaagcatttgctcatcgcatcgcatttgggtattttcattaaattc
cctttagaagatgtgcgcgagatgggaagaaatgctcgtggggttatagggattaggctg
aatgaaaacgattttgttgtcggtgcggtcgttattagcgatgatggcaacaagcttttg
agcgtgagcgaaaacgggcttggcaagcaaactttagccgaagcgtatagagagcaatct
cgtggaggtaaggggatcattggcatgaagctcactcaaaaaaccggcaatctagtgggc
gttatcagcgtagatgatgagaacctagatttgatgatccttactgcaagcgcaaaaatg
atcagagtttctattaaagatattagagaaaccggaagaaacgctagtggggtaaagctc
ataaacaccgccgataaagtcatgtatgtcaattcttgccctaaagaagaagagccagaa
aatttagaaaaccctcctgcacaattatttgagtga
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