KEGG   Helicobacter pylori oki112: HPOKI112_03730
Entry
HPOKI112_03730    CDS       T03723                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hpyc  Helicobacter pylori oki112
Brite
KEGG Orthology (KO) [BR:hpyc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HPOKI112_03730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpyc03019]
    HPOKI112_03730
   03009 Ribosome biogenesis [BR:hpyc03009]
    HPOKI112_03730
   03036 Chromosome and associated proteins [BR:hpyc03036]
    HPOKI112_03730
Enzymes [BR:hpyc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HPOKI112_03730
Messenger RNA biogenesis [BR:hpyc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPOKI112_03730
Ribosome biogenesis [BR:hpyc03009]
 Eukaryotic type
  90S particles
   RNase
    HPOKI112_03730
 Prokaryotic type
  rRNA processing factors
   HPOKI112_03730
Chromosome and associated proteins [BR:hpyc03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HPOKI112_03730
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase
Other DBs
NCBI-ProteinID: AHN36182
LinkDB
Position
complement(745109..745828)
AA seq 239 aa
MKNKRSQNSPYVTPNNPYTTLEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAV
LGLVIGELLYHKFYQYDEGKLSKLRASIVSTHGFTKLAKAIALQDYLRVSSSEEISNGRE
KPSILSSAFEALMAGVYLEAGLAKVRKIMQNLLNRAYKRLDLEHLFMDYKTALQELTQAQ
FCVIPTYQLLQEKGPDHHKEFEMALYIQDKMYATAKGKSKKEAEQQCAYYALQKLKEAK
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaaaaacaaacgctctcaaaacagcccttatgtaacgcctaataacccttacacaacg
ctagaaaaagctttagggtattcttttaaagacaagcgtttattggagcaagccttaacg
cacaaatcatgcaagctcgctttaaacaatgagcgcttggaatttttaggcgatgcggtg
ttgggtttggtgataggggagttgctataccataaattctatcaatatgatgaggggaaa
ctctctaaattaagggcttctattgtgagcacgcatggttttactaaattagcgaaagcg
attgctttgcaagattatttgcgcgtttcttcttctgaagaaatttctaatgggagggaa
aaaccctctattctgtcaagcgcttttgaggctttaatggccggggtgtatttagaagcg
gggttagctaaggtgcgcaaaatcatgcaaaatttactcaatcgcgcttacaagcgtttg
gatttggagcatttgtttatggactataaaaccgctttacaggaattgacccaagcgcaa
ttttgcgtgatccccacttaccaattgctccaagaaaaagggccagaccatcataaagaa
tttgaaatggctctatacattcaagataaaatgtatgcgaccgctaaaggcaaaagtaaa
aaagaagccgaacagcaatgcgcttattatgcgcttcaaaaacttaaggaagccaaatga

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