Helicobacter pylori oki112: HPOKI112_03790
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Entry
HPOKI112_03790 CDS
T03723
Name
(GenBank) family 4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyc
Helicobacter pylori oki112
Pathway
hpyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI112_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyc03400
]
HPOKI112_03790
Enzymes [BR:
hpyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOKI112_03790
DNA repair and recombination proteins [BR:
hpyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI112_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN36194
UniProt:
X2HSP6
LinkDB
All DBs
Position
complement(759048..759677)
Genome browser
AA seq
209 aa
AA seq
DB search
MQLSRLQTLRSLYMERFLGETYTDISLTKPQNKPLNKQVHEGIENCNLCKRHQHSKPVIG
LFNPTSKLAFITLTPMLDSQLNFLNNLKAAMLESIIQKVFNYPLKDCSILSLLKCDSNSL
NLEEEINACLPHLTWQLDNSASKVIVVFGEILPKHLLNLSKEESFGRIVSLKTKHFLSTH
ALEDMLKNPTLKKEALAHFKIALQFLNQS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
ttgcaactttcacgccttcaaactttacgctccctttatatggagcgttttttgggcgaa
acttacacggatattagccttaccaagccccaaaacaaaccccttaacaaacaagttcat
gagggtatagaaaattgcaatctgtgcaaacgccatcaacattcaaaaccggtgatcggg
ctttttaaccccacttccaagctcgcttttatcacgctcacccccatgctggatagccaa
ttaaactttttaaacaatttaaaagcggccatgttggagagcattatccaaaaggttttt
aactaccccttaaaagattgcagtattttatcgctccttaaatgcgactctaacagcctt
aatttagaagaagaaatcaacgcatgcctacctcatttaacctggcaattagacaatagc
gcttcaaaagtcattgtggtatttggcgagattttgcccaaacaccttttaaacctttct
aaagaagaatcctttgggcgcatcgtgtctttaaaaaccaaacattttttaagcacccat
gctttagaggacatgctcaaaaaccccacgctcaaaaaagaagcgttagcacattttaaa
atagcgctccagtttctcaatcagtcttaa
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