Helicobacter pylori oki112: HPOKI112_04660 Help Entry HPOKI112_04660    CDS       T03723                                  Name (GenBank) toxin   KO K11028   vacuolating cytotoxin Organism hpyc  Helicobacter pylori oki112 Pathway hpyc03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:hpyc00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     HPOKI112_04660  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:hpyc02000]     HPOKI112_04660    02044 Secretion system [BR:hpyc02044]     HPOKI112_04660    02042 Bacterial toxins [BR:hpyc02042]     HPOKI112_04660 Transporters [BR:hpyc02000]  Other transporters   Pores ion channels [TC:1]    HPOKI112_04660 Secretion system [BR:hpyc02044]  Type V secretion system   Autotransporter-1 (AT-1) family    HPOKI112_04660 Bacterial toxins [BR:hpyc02042]  Type III toxins: Intracellular toxins   Others    Vacuolating cytotoxin     HPOKI112_04660  Type II toxins: Membrane damaging toxins   Pore-forming toxins, Other    HPOKI112_04660 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VacA Motif Other DBs NCBI-ProteinID:  AHN36352 LinkDB All DBs Position 946386..950297 Genome browser AA seq 1303 aa AA seqDB search MEIQQTHRKINRPLVSLALVGALVSITPQQSHAAFFTTVIIPAIVGGIATGAAVGTVSGL LSWGLKQAEEANKTPDKPDKVWRIQAGRGFNNFPNKEYDLYKSLLSSKIDGGWDWGNAAR HYWVKDGQWNKLEVDMKDAVGTYNLSGLINFTGGDLDVNMQKATLRLGQFNGNSFTSFKD GANRTTRVDFNAKNILIDNFVEINNRVGSGAGRKASSTVLTLQASEKITSRENAEISLYD GATLNLVSSSNHSVDLYGKVWMGRLQYVGAYLAPSYSTIDTSKVEGEMNFRHLAVGDQNA AQAGIIANKKTNIGVLDLWQSAGLNIIAPPEGGYESKNKDNPQNNPKNDTQKTETEPTQV IDGPFAGAKDTVVNIFRLNTNADGTIRVGGFKASLTTNAAHLHIGEGGVNLSNQASGRTL LVENLTGNITVEGALRVNNQVGGSAVAGSSANFEFKAGADTNNGTATFNNDIHLGKAVNL RVDAHTAYFNGNIYLGKSTNLRVNGHSAHFKNIDATKSDNGLNTSALDFSGVTDKVNINK LTTSATNVNIKNFDIKELVVTTRVQSFGQYTIFGENIGDKSRIGVVSLQTGYSPAYSGGV TFKGGKKLVIDELYHAPWNYFDARNVTDVEINKKILFGAPGYIAGKTGLMFNNLTLNSNA SMDYGKDLDLTIQGHFTNNQGTMNLFVQDGRVATLNAGHQASMIFNNVVDSATGFYKPLI KINNAQNLTKNKEHVLVKARNIDYNLVGVQGASYDNISASNTNLQDQFKERLALYNNNNR MDICVVRKNNTDDIKACGMAIGNQSMVNNPENYKYLEGKAWKNTGINKTANNTTIAVNLG NNSAPTENGGNTTNLPTNTTNKARFASYALIKNAPFARYSATPNLVAINQHDFGTIESVF ELANRSSDIDTLYANSGGTGRDLLQTLLIDSHNAGYARTMIDATSANEITKQLNTATTTL SNIASLEHKTSGLQTLSLSNAMILNSRLVNLSRRHTNHIDSFAQRLQALKGQRFASLESA AEVLYQFAPKYEKPTNVWANAIGGTSLNNGSNASLYGTSAGVDAYLNGEVQAIVGGFGSY GYSSFSNQANSLNSGANNTNFGVYSRLFANQHEFDFEAQGALGSDQSSLNFKSTLLQDLN QSYHYLAYSAATRASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFKSNSNQKVALSNGSS SQHLFNASANMEARYYYGDTSYFYMNAGVLQEFARFGSNNAASLNTFKVNATRNPLNTHA RVMMGGELQLAKEVFLNLGVVYLHNLISNASHFASNLGMRYSF NT seq 3912 nt NT seq  +upstreamnt  +downstreamnt atggaaatacaacaaacacaccgcaaaatcaatcgccctctggtttctcttgctttagta ggagcgttagtcagcatcacaccgcaacaaagtcatgccgcctttttcacaaccgtgatc attccagccattgttgggggtatcgctacaggcgctgctgtaggaacggtctcagggctt cttagctgggggctaaaacaagccgaagaagccaataaaaccccggataaacccgataaa gtttggcgcattcaagcaggcagaggctttaataatttccctaacaaggaatacgactta tacaaatcccttttatccagtaagattgatggaggttgggattgggggaatgccgctagg cattattgggtcaaagacgggcaatggaacaagcttgaagtggatatgaaagacgctgta gggacttataacctctcaggccttatcaactttaccggtggggatttagatgtcaatatg caaaaagccactttgcgtttgggccaattcaacggcaattctttcacaagctttaaggat ggcgctaaccgcaccacgagagtggattttaacgctaaaaatatcttaattgataatttt gtagaaatcaataatcgtgtgggttctggagccgggaggaaagccagctctacggttttg actttgcaagcttcagaaaaaattacaagccgtgaaaacgcggaaatttctctttatgat ggtgccacgctcaatttggtttcaagctcaaatcatagcgttgatctttatggtaaggtg tggatgggccgtttgcaatacgtgggagcgtatttagccccttcatacagcacgatagac acttcaaaagtagaaggggaaatgaattttcgccatctcgctgtgggtgatcaaaacgcc gctcaagcgggcattatcgctaataaaaagactaatattggtgtgttagatttgtggcaa agtgcggggttaaacattatcgctcctccagaaggcggttatgagagtaaaaacaaagat aaccctcaaaataaccctaaaaatgacacgcaaaaaacagaaactgagcccacgcaagtc attgatgggccttttgctggcgccaaagacacggtggtcaatatttttcgtttgaacact aacgctgatggcacgattagagtgggagggtttaaagcttctcttaccaccaatgcggct catttgcatatcggcgaaggcggtgtcaatctgtccaatcaagcgagcgggcgcaccctt ttagtggaaaatctaaccgggaatatcaccgttgagggggctttaagggtgaataatcaa gtgggcggttctgctgtggcaggctcaagcgcgaattttgagtttaaggctggtgctgat accaacaacggcacagccacttttaataacgatatccatctaggaaaagcggtgaattta agagtggatgctcatacagcttattttaatggcaatatttatctgggaaaatccacgaat ttaagagtgaatggccatagcgctcattttaaaaatattgatgccacaaagagcgataac gggctaaacactagtgctttggattttagcggcgttacagacaaagtcaatatcaacaag ctcactacatctgccactaatgtgaacattaaaaactttgacattaaggaattagtggtt acaacccgtgttcagagttttgggcaatacactatttttggcgaaaatataggcgataag tctcgcattggtgtcgttagtttgcaaacgggatatagcccggcctattctgggggcgtt acttttaaaggtggtaaaaaactggttatagatgagctttaccatgccccttggaattat tttgacgctaggaatgttactgatgttgaaatcaacaaaaaaattctttttggagcccca ggatacattgctggcaaaacagggcttatgtttaataacctaaccctaaacagcaacgca agcatggattatggtaaagatttggatttaaccattcaagggcatttcaccaataatcaa ggcacgatgaatctttttgtccaagatgggcgtgtagcgaccttaaatgcaggccatcaa gcaagcatgatatttaataatgtagtggatagcgcgaccggattttacaaaccactcatt aagatcaataacgctcaaaacctcactaaaaataaagaacatgttttagtgaaagcgcga aacattgattataatttagtaggagtgcaaggcgctagttatgacaatatttctgcaagc aataccaatctgcaagatcaattcaaagagcgcctagccctttataacaacaataaccgc atggatatttgtgtggtgcgaaaaaataataccgatgatattaaagcatgcgggatggct atcggcaatcaaagcatggtgaataaccctgaaaattacaagtatcttgaaggtaaggca tggaaaaatacagggatcaataaaacggctaacaacaccacaatcgctgtcaatttaggc aacaattctgcacctactgagaatggtggcaataccacaaatttacctacaaacaccact aacaaggcgcgttttgctagctacgctctcataaagaacgctcctttcgctcgttatagc gctactcctaatttagtcgctatcaatcagcatgattttggcaccattgaaagcgtgttt gaattggctaaccgctctagtgatattgacacgctttatgccaactcaggcggcacaggc agggatctcttacaaaccttattgattgatagccataatgcgggttatgccagaacaatg attgatgctacaagcgctaatgaaatcaccaagcaattgaatacggccactaccacttta agcaacatagccagtttagagcataagacaagcggcttacaaactttgagtttgagtaat gcgatgattttaaattctcgtttagtcaatctctctagaaggcacaccaaccatattgac tcgttcgctcaacgcttacaagctttaaaaggccaaagattcgcttctttagaaagcgcg gcagaagtgttgtatcaatttgcccccaaatatgaaaaacctaccaatgtttgggctaac gctattggaggaacgagcttgaataatggctccaacgcttcattgtatggcacaagcgcc ggcgtagatgcttaccttaacggggaagtacaagccattgtgggcggttttggaagctat ggttatagctcctttagtaatcaagcgaactctcttaactctggggccaataacactaat tttggcgtgtatagccgtctctttgccaaccagcatgaatttgactttgaagctcaaggg gcactagggagtgatcaatcaagcttgaatttcaaaagcactctactgcaagatttgaat caaagctatcattacttagcctatagcgctgcaacaagagcgagctatggttatgacttt gcgttttttaggaacgctttagtgttaaaaccaagcgtgggcgtgagctataaccattta ggctcaaccaactttaaaagcaacagcaatcaaaaagtggctttgagtaatggctctagc agtcagcatttattcaacgctagcgctaatatggaagcgcgctattattatggggacact tcatacttctatatgaacgctggagttttacaagagttcgctcgctttggatctaataac gccgcgtctttaaacacttttaaagtgaatgccactcgtaaccctttaaatacccatgcg agagtgatgatgggtggggaattgcaattggctaaagaagtgtttttgaatttgggcgtt gtttatttgcacaatttgatttccaacgcaagccatttcgcttccaatttaggaatgagg tatagtttctaa

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