Helicobacter pylori oki112: HPOKI112_05485
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Entry
HPOKI112_05485 CDS
T03723
Name
(GenBank) mechanosensitive ion channel protein
KO
K16052
MscS family membrane protein
Organism
hpyc
Helicobacter pylori oki112
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpyc02000
]
HPOKI112_05485
Transporters [BR:
hpyc02000
]
Other transporters
Pores ion channels [TC:
1
]
HPOKI112_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Msl2-3_C
B
Motif
Other DBs
NCBI-ProteinID:
AHN36478
LinkDB
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Position
complement(1116841..1118712)
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AA seq
623 aa
AA seq
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MRLLLWWVLVLSLFLNPLRALEEHETDAVDLFLIFNQINQLNQVIETYKKNPERSAEVSL
YNTQKNDLIKSLTSKVLNERDKIGIDINQNLKEQEKIKKRLSKSIKGDDFYTFMKDRLSL
DILLIDEILYRFIDKIRSSIDIFSEQKDVESISDAFLLRLGQFKLYTFPKNLDNVKMHEL
EQMFSDYELRLNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKVLPFTTHSLQVS
KIVLALTILALLLGLRKLITWLLALLLDRIFEIMQRNKKMHVNVQSSIVSPVSVFLALFS
CDVALDIFYYPNASPPKVSMWVGAVYIMLLAWLVIALFKGYGEALVTNMATKSTHNFRKE
VINLILKVVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVIL
LLDNSFSQGDWIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVG
RRIKMEIGLTYSSSQSALQLCVKDIKEMLENHPKIANGADSALQNASDYRYMFKKDIVSI
DDFLGYKNNLFVFLDQFADSSINILVYCFSKTVVWEEWLEVKEDVMLKIMRIVEKHHLSF
AFPSQSLYVESLPEVSLKEGAKI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttattattgtggtgggtattggtattatcgctctttttaaatcctttgagagcg
cttgaagagcatgaaacagatgcggtggatttgtttttaattttcaatcaaatcaaccag
ctcaatcaagtcattgaaacttacaaaaaaaaccctgaaagaagcgctgaagtctctctg
tataacacccaaaagaatgatttgattaaaagtttgacttctaaagtgttgaatgaaagg
gataagatcgggattgatatcaatcaaaatttaaaagagcaggaaaaaatcaaaaagcgt
ttgtctaaaagcattaagggcgatgatttctacactttcatgaaagacagattgtcttta
gatattttgttgatagatgaaattttgtatcgttttatagataaaatcaggagcagtatt
gatatttttagcgaacaaaaagatgtggaaagtatcagcgatgctttccttttgcgttta
gggcaattcaaactctacactttccctaaaaatttagacaatgtcaaaatgcatgaatta
gagcagatgtttagcgattatgaattgcgtttgaacacttacactgaagtcttgcgttac
attaaaaaccaccctaaagaagtgcttcctaaaaacttgatcatggaagtgaatatggat
tttgtgttaaacaaaatcagcaaggttttgcctttcacaacccatagcttgcaagtgagt
aaaatcgtgctggctttgacgattttagccttattgctgggtttaaggaagttgatcact
tggcttttagccttattgttagatcgtatttttgaaatcatgcagcgcaataaaaaaatg
catgtcaatgtgcaaagcagcattgtttcgccggtttctgtctttttagccttattcagt
tgcgatgtggctttagatattttctactaccctaacgcatcgcctcctaaagtttctatg
tgggtgggtgcggtgtatatcatgcttttagcatggttagtgatagcgctttttaaaggc
tatggggaagcgttagttacgaatatggctaccaaaagcacgcacaattttaggaaagaa
gtgatcaacttgatcttaaaagtcgtgtattttttgatttttattgtcgcgcttttaggg
gttttgaagcaactagggtttaatgtttcagccatcatcgcttctttagggattgggggg
ttagcggtggctttggcggttaaagatgtgttggcgaatttttttgcttctgtcatttta
ttgttagacaattcgttttctcaaggggattggatcgtgtgcggtgaagtggaaggcacg
gtggtggaaatggggttaaggcgcaccacgatcagagcttttgataacgctcttttgtcc
gtgcctaattcagagttagccggaaaacccatcaggaattggagccgtcgtaaagtggga
aggcgtattaaaatggaaataggcttaacctatagctccagccaaagcgctttacagctt
tgcgtgaaagacattaaagaaatgctagaaaaccaccctaaaatcgccaatggagccgat
agcgctttgcaaaacgcgagcgattaccgctacatgtttaaaaaagatattgtttctatt
gacgattttttagggtataaaaacaatctgtttgtctttttggatcaatttgcggacagc
tctattaatattttagtgtattgcttttctaagacggtggtttgggaagagtggctagaa
gtcaaagaagacgtgatgttaaaaatcatgaggattgtagaaaagcaccatttgagcttt
gcttttccatcacagagtttgtatgtggagagtttgccagaagttagcctgaaagaaggg
gctaaaatctaa
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